PDB entry 1tf1
View 1tf1 on RCSB PDB site
Description: Crystal Structure of the E. coli Glyoxylate Regulatory Protein Ligand Binding Domain
Class: transcription
Keywords: Midwest Center for Structural Genomics, GlcR, ligand binding domain, transcriptional regulator, PSI, Protein Structure Initiative, MCSG
Deposited on
2004-05-26, released
2004-08-03
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.214
AEROSPACI score: 0.48
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Negative regulator of allantoin and glyoxylate utilization operons
Species: Escherichia coli [TaxId:562]
Gene: glxa3
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1tf1a1, d1tf1a2 - Chain 'B':
Compound: Negative regulator of allantoin and glyoxylate utilization operons
Species: Escherichia coli [TaxId:562]
Gene: glxa3
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1tf1b1, d1tf1b2 - Chain 'C':
Compound: Negative regulator of allantoin and glyoxylate utilization operons
Species: Escherichia coli [TaxId:562]
Gene: glxa3
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1tf1c1, d1tf1c2 - Chain 'D':
Compound: Negative regulator of allantoin and glyoxylate utilization operons
Species: Escherichia coli [TaxId:562]
Gene: glxa3
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1tf1d1, d1tf1d2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1tf1A (A:)
mgsshhhhhhssgrenlyfqghmdvlsvagpfmrrlmllsgetvnvairngneavligql
ecksmvrmcaplgsrlplhasgagkallyplaeeelmsiilqtglqqftpttlvdmptll
kdleqarelgytvdkeehvvglnciasaiyddvgsvvaaisisgpssrltedrfvsqgel
vrdtardistalglkahp
Sequence, based on observed residues (ATOM records): (download)
>1tf1A (A:)
grenlyfqghmdvlsvagpfmrrlmllsgetvnvairngneavligqlecksmvrmcapl
gsrlplhasgagkallyplaeeelmsiilqtglqqftpttlvdmptllkdleqarelgyt
vdkeehvvglnciasaiyddvgsvvaaisisgpssrltedrfvsqgelvrdtardistal
glka
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1tf1B (B:)
mgsshhhhhhssgrenlyfqghmdvlsvagpfmrrlmllsgetvnvairngneavligql
ecksmvrmcaplgsrlplhasgagkallyplaeeelmsiilqtglqqftpttlvdmptll
kdleqarelgytvdkeehvvglnciasaiyddvgsvvaaisisgpssrltedrfvsqgel
vrdtardistalglkahp
Sequence, based on observed residues (ATOM records): (download)
>1tf1B (B:)
yfqghmdvlsvagpfmrrlmllsgetvnvairngneavligqlecksmvrmcaplgsrlp
lhasgagkallyplaeeelmsiilqtglqqftpttlvdmptllkdleqarelgytvdkee
hvvglnciasaiyddvgsvvaaisisgpssrltedrfvsqgelvrdtardistalglk
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1tf1C (C:)
mgsshhhhhhssgrenlyfqghmdvlsvagpfmrrlmllsgetvnvairngneavligql
ecksmvrmcaplgsrlplhasgagkallyplaeeelmsiilqtglqqftpttlvdmptll
kdleqarelgytvdkeehvvglnciasaiyddvgsvvaaisisgpssrltedrfvsqgel
vrdtardistalglkahp
Sequence, based on observed residues (ATOM records): (download)
>1tf1C (C:)
lyfqghmdvlsvagpfmrrlmllsgetvnvairngneavligqlecksmvrmcaplgsrl
plhasgagkallyplaeeelmsiilqtglqqftpttlvdmptllkdleqarelgytvdke
ehvvglnciasaiyddvgsvvaaisisgpssrltedrfvsqgelvrdtardistalglk
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1tf1D (D:)
mgsshhhhhhssgrenlyfqghmdvlsvagpfmrrlmllsgetvnvairngneavligql
ecksmvrmcaplgsrlplhasgagkallyplaeeelmsiilqtglqqftpttlvdmptll
kdleqarelgytvdkeehvvglnciasaiyddvgsvvaaisisgpssrltedrfvsqgel
vrdtardistalglkahp
Sequence, based on observed residues (ATOM records): (download)
>1tf1D (D:)
grenlyfqghmdvlsvagpfmrrlmllsgetvnvairngneavligqlecksmvrmcapl
gsrlplhasgagkallyplaeeelmsiilqtglqqftpttlvdmptllkdleqarelgyt
vdkeehvvglnciasaiyddvgsvvaaisisgpssrltedrfvsqgelvrdtardistal
glk