PDB entry 1tdz
View 1tdz on RCSB PDB site
Description: Crystal Structure Complex Between the Lactococcus Lactis FPG (Mutm) and a FAPY-dG Containing DNA
Class: hydrolase/DNA
Keywords: DNA repair; fpg; mutm; fapy g, hydrolase-DNA complex
Deposited on
2004-05-24, released
2004-09-07
The last revision prior to the SCOPe 2.07 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-25.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.18
AEROSPACI score: 0.52
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: formamidopyrimidine-DNA glycosylase
Species: LACTOCOCCUS LACTIS [TaxId:1358]
Gene: mutm, FPG
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1tdza1, d1tdza2, d1tdza3 - Chain 'B':
Compound: 5'-d(*cp*tp*cp*tp*tp*tp*(fox)p*tp*tp*tp*cp*tp*cp*g)-3'
- Chain 'C':
Compound: 5'-d(*gp*cp*gp*ap*gp*ap*ap*ap*cp*ap*ap*ap*gp*a)-3'
- Heterogens: ZN, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1tdzA (A:)
mpelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkyl
ifeigddfrlishlrmegkyrlatldaprekhdhltmkfadgqliyadvrkfgtwelist
dqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlw
lakihpeketnqliessihllhdsiieilqkaiklggssirtysalgstgkmqnelqvyg
ktgekcsrcgaeiqkikvagrgthfcpvcqqk
Sequence, based on observed residues (ATOM records): (download)
>1tdzA (A:)
elpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylif
eigddfrlishlrmegkyrlatldaprekhdhltmkfadgqliyadvrkfgtwelistdq
vlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwla
kihpeketnqliessihllhdsiieilqkaiklggssilgstgkmqnelqvygktgekcs
rcgaeiqkikvagrgthfcpvcqqk
- Chain 'B':
No sequence available.
- Chain 'C':
No sequence available.