PDB entry 1tb3

View 1tb3 on RCSB PDB site
Description: Crystal Structure Analysis of Recombinant Rat Kidney Long-chain Hydroxy Acid Oxidase
Class: oxidoreductase
Keywords: long chain alpha-hydroxy acid oxidase, flavoprotein, oxidase, OXIDOREDUCTASE
Deposited on 2004-05-19, released 2005-02-01
The last revision prior to the SCOPe 2.01 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.239
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hydroxyacid oxidase 3
    Species: Rattus norvegicus [TaxId:10116]
    Gene: HAO3, HAOX3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1tb3a1
  • Chain 'B':
    Compound: Hydroxyacid oxidase 3
    Species: Rattus norvegicus [TaxId:10116]
    Gene: HAO3, HAOX3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1tb3b_
  • Chain 'C':
    Compound: Hydroxyacid oxidase 3
    Species: Rattus norvegicus [TaxId:10116]
    Gene: HAO3, HAOX3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1tb3c_
  • Chain 'D':
    Compound: Hydroxyacid oxidase 3
    Species: Rattus norvegicus [TaxId:10116]
    Gene: HAO3, HAOX3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1tb3d_
  • Chain 'E':
    Compound: Hydroxyacid oxidase 3
    Species: Rattus norvegicus [TaxId:10116]
    Gene: HAO3, HAOX3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1tb3e_
  • Chain 'F':
    Compound: Hydroxyacid oxidase 3
    Species: Rattus norvegicus [TaxId:10116]
    Gene: HAO3, HAOX3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1tb3f_
  • Chain 'G':
    Compound: Hydroxyacid oxidase 3
    Species: Rattus norvegicus [TaxId:10116]
    Gene: HAO3, HAOX3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1tb3g_
  • Chain 'H':
    Compound: Hydroxyacid oxidase 3
    Species: Rattus norvegicus [TaxId:10116]
    Gene: HAO3, HAOX3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1tb3h_
  • Heterogens: FMN, ACY, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1tb3A (A:)
plvcladfkahaqkqlsktswdfiegeaddgityseniaafkrirlrprylrdmskvdtr
ttiqgqeisapicisptafhsiawpdgekstaraaqeanicyvissyasysledivaaap
egfrwfqlymksdwdfnkqmvqraealgfkalvitidtpvlgnrrrdkrnqlnleanill
kdlralkeekptqsvpvsfpkasfcwndlsllqsitrlpiilkgiltkedaelamkhnvq
givvsnhggrqldevsasidalrevvaavkgkievymdggvrtgtdvlkalalgarcifl
grpilwglackgedgvkevldiltaelhrcmtlsgcqsvaeispdliqfsrl

    Sequence, based on observed residues (ATOM records): (download) 
    >1tb3A (A:)
plvcladfkahaqkqlsktswdfiegeaddgityseniaafkrirlrprylrdmskvdtr
ttiqgqeisapicisptafhsiawpdgekstaraaqeanicyvissyasysledivaaap
egfrwfqlymksdwdfnkqmvqraealgfkalvitidtpvlgnrrrdkrnqlnleakdlr
alkeasfcwndlsllqsitrlpiilkgiltkedaelamkhnvqgivvsnhggrqldevsa
sidalrevvaavkgkievymdggvrtgtdvlkalalgarciflgrpilwglackgedgvk
evldiltaelhrcmtlsgcqsvaeispdliqf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1tb3B (B:)
plvcladfkahaqkqlsktswdfiegeaddgityseniaafkrirlrprylrdmskvdtr
ttiqgqeisapicisptafhsiawpdgekstaraaqeanicyvissyasysledivaaap
egfrwfqlymksdwdfnkqmvqraealgfkalvitidtpvlgnrrrdkrnqlnleanill
kdlralkeekptqsvpvsfpkasfcwndlsllqsitrlpiilkgiltkedaelamkhnvq
givvsnhggrqldevsasidalrevvaavkgkievymdggvrtgtdvlkalalgarcifl
grpilwglackgedgvkevldiltaelhrcmtlsgcqsvaeispdliqfsrl

    Sequence, based on observed residues (ATOM records): (download) 
    >1tb3B (B:)
plvcladfkahaqkqlsktswdfiegeaddgityseniaafkrirlrprylrdmskvdtr
ttiqgqeisapicisptafhsiawpdgekstaraaqeanicyvissyasysledivaaap
egfrwfqlymksdwdfnkqmvqraealgfkalvitidtpvlgnrrrdkrnqlnleaalka
sfcwndlsllqsitrlpiilkgiltkedaelamkhnvqgivvsnhggrqldevsasidal
revvaavkgkievymdggvrtgtdvlkalalgarciflgrpilwglackgedgvkevldi
ltaelhrcmtlsgcqsvaeispdliqf

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1tb3C (C:)
plvcladfkahaqkqlsktswdfiegeaddgityseniaafkrirlrprylrdmskvdtr
ttiqgqeisapicisptafhsiawpdgekstaraaqeanicyvissyasysledivaaap
egfrwfqlymksdwdfnkqmvqraealgfkalvitidtpvlgnrrrdkrnqlnleanill
kdlralkeekptqsvpvsfpkasfcwndlsllqsitrlpiilkgiltkedaelamkhnvq
givvsnhggrqldevsasidalrevvaavkgkievymdggvrtgtdvlkalalgarcifl
grpilwglackgedgvkevldiltaelhrcmtlsgcqsvaeispdliqfsrl

    Sequence, based on observed residues (ATOM records): (download) 
    >1tb3C (C:)
plvcladfkahaqkqlsktswdfiegeaddgityseniaafkrirlrprylrdmskvdtr
ttiqgqeisapicisptafhsiawpdgekstaraaqeanicyvissyasysledivaaap
egfrwfqlymksdwdfnkqmvqraealgfkalvitidtpvlgnrrrdkrnqlnleakdlr
alkeasfcwndlsllqsitrlpiilkgiltkedaelamkhnvqgivvsnhggrqldevsa
sidalrevvaavkgkievymdggvrtgtdvlkalalgarciflgrpilwglackgedgvk
evldiltaelhrcmtlsgcqsvaeispdliqf

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1tb3D (D:)
plvcladfkahaqkqlsktswdfiegeaddgityseniaafkrirlrprylrdmskvdtr
ttiqgqeisapicisptafhsiawpdgekstaraaqeanicyvissyasysledivaaap
egfrwfqlymksdwdfnkqmvqraealgfkalvitidtpvlgnrrrdkrnqlnleanill
kdlralkeekptqsvpvsfpkasfcwndlsllqsitrlpiilkgiltkedaelamkhnvq
givvsnhggrqldevsasidalrevvaavkgkievymdggvrtgtdvlkalalgarcifl
grpilwglackgedgvkevldiltaelhrcmtlsgcqsvaeispdliqfsrl

    Sequence, based on observed residues (ATOM records): (download) 
    >1tb3D (D:)
plvcladfkahaqkqlsktswdfiegeaddgityseniaafkrirlrprylrdmskvdtr
ttiqgqeisapicisptafhsiawpdgekstaraaqeanicyvissyasysledivaaap
egfrwfqlymksdwdfnkqmvqraealgfkalvitidtpvlgnrrrdkrnqlnlealral
kasfcwndlsllqsitrlpiilkgiltkedaelamkhnvqgivvsnhggrqldevsasid
alrevvaavkgkievymdggvrtgtdvlkalalgarciflgrpilwglackgedgvkevl
diltaelhrcmtlsgcqsvaeispdliqf

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1tb3E (E:)
plvcladfkahaqkqlsktswdfiegeaddgityseniaafkrirlrprylrdmskvdtr
ttiqgqeisapicisptafhsiawpdgekstaraaqeanicyvissyasysledivaaap
egfrwfqlymksdwdfnkqmvqraealgfkalvitidtpvlgnrrrdkrnqlnleanill
kdlralkeekptqsvpvsfpkasfcwndlsllqsitrlpiilkgiltkedaelamkhnvq
givvsnhggrqldevsasidalrevvaavkgkievymdggvrtgtdvlkalalgarcifl
grpilwglackgedgvkevldiltaelhrcmtlsgcqsvaeispdliqfsrl

    Sequence, based on observed residues (ATOM records): (download) 
    >1tb3E (E:)
plvcladfkahaqkqlsktswdfiegeaddgityseniaafkrirlrprylrdmskvdtr
ttiqgqeisapicisptafhsiawpdgekstaraaqeanicyvissyasysledivaaap
egfrwfqlymksdwdfnkqmvqraealgfkalvitidtpvlgnrrrdkrnqlnleaasfc
wndlsllqsitrlpiilkgiltkedaelamkhnvqgivvsnhggrqldevsasidalrev
vaavkgkievymdggvrtgtdvlkalalgarciflgrpilwglackgedgvkevldilta
elhrcmtlsgcqsvaeispdliqf

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1tb3F (F:)
plvcladfkahaqkqlsktswdfiegeaddgityseniaafkrirlrprylrdmskvdtr
ttiqgqeisapicisptafhsiawpdgekstaraaqeanicyvissyasysledivaaap
egfrwfqlymksdwdfnkqmvqraealgfkalvitidtpvlgnrrrdkrnqlnleanill
kdlralkeekptqsvpvsfpkasfcwndlsllqsitrlpiilkgiltkedaelamkhnvq
givvsnhggrqldevsasidalrevvaavkgkievymdggvrtgtdvlkalalgarcifl
grpilwglackgedgvkevldiltaelhrcmtlsgcqsvaeispdliqfsrl

    Sequence, based on observed residues (ATOM records): (download) 
    >1tb3F (F:)
plvcladfkahaqkqlsktswdfiegeaddgityseniaafkrirlrprylrdmskvdtr
ttiqgqeisapicisptafhsiawpdgekstaraaqeanicyvissyasysledivaaap
egfrwfqlymksdwdfnkqmvqraealgfkalvitidtpvlgnrrrdkrnqlnleakdlr
alkeasfcwndlsllqsitrlpiilkgiltkedaelamkhnvqgivvsnhggrqldevsa
sidalrevvaavkgkievymdggvrtgtdvlkalalgarciflgrpilwglackgedgvk
evldiltaelhrcmtlsgcqsvaeispdliqf

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1tb3G (G:)
plvcladfkahaqkqlsktswdfiegeaddgityseniaafkrirlrprylrdmskvdtr
ttiqgqeisapicisptafhsiawpdgekstaraaqeanicyvissyasysledivaaap
egfrwfqlymksdwdfnkqmvqraealgfkalvitidtpvlgnrrrdkrnqlnleanill
kdlralkeekptqsvpvsfpkasfcwndlsllqsitrlpiilkgiltkedaelamkhnvq
givvsnhggrqldevsasidalrevvaavkgkievymdggvrtgtdvlkalalgarcifl
grpilwglackgedgvkevldiltaelhrcmtlsgcqsvaeispdliqfsrl

    Sequence, based on observed residues (ATOM records): (download) 
    >1tb3G (G:)
plvcladfkahaqkqlsktswdfiegeaddgityseniaafkrirlrprylrdmskvdtr
ttiqgqeisapicisptafhsiawpdgekstaraaqeanicyvissyasysledivaaap
egfrwfqlymksdwdfnkqmvqraealgfkalvitidtpvlgnrrrdkrnqlnlearalk
easfcwndlsllqsitrlpiilkgiltkedaelamkhnvqgivvsnhggrqldevsasid
alrevvaavkgkievymdggvrtgtdvlkalalgarciflgrpilwglackgedgvkevl
diltaelhrcmtlsgcqsvaeispdliqf

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1tb3H (H:)
plvcladfkahaqkqlsktswdfiegeaddgityseniaafkrirlrprylrdmskvdtr
ttiqgqeisapicisptafhsiawpdgekstaraaqeanicyvissyasysledivaaap
egfrwfqlymksdwdfnkqmvqraealgfkalvitidtpvlgnrrrdkrnqlnleanill
kdlralkeekptqsvpvsfpkasfcwndlsllqsitrlpiilkgiltkedaelamkhnvq
givvsnhggrqldevsasidalrevvaavkgkievymdggvrtgtdvlkalalgarcifl
grpilwglackgedgvkevldiltaelhrcmtlsgcqsvaeispdliqfsrl

    Sequence, based on observed residues (ATOM records): (download) 
    >1tb3H (H:)
plvcladfkahaqkqlsktswdfiegeaddgityseniaafkrirlrprylrdmskvdtr
ttiqgqeisapicisptafhsiawpdgekstaraaqeanicyvissyasysledivaaap
egfrwfqlymksdwdfnkqmvqraealgfkalvitidtpvlgnrrrdkrnqlnleakdlr
alkeasfcwndlsllqsitrlpiilkgiltkedaelamkhnvqgivvsnhggrqldevsa
sidalrevvaavkgkievymdggvrtgtdvlkalalgarciflgrpilwglackgedgvk
evldiltaelhrcmtlsgcqsvaeispdliqf