PDB entry 1t6v

View 1t6v on RCSB PDB site
Description: Crystal structure analysis of the nurse shark new antigen receptor (NAR) variable domain in complex with lysozyme
Class: hydrolase/immune system
Keywords: immunoglobulin fold, protein-protein complex, hydrolase/immune system complex
Deposited on 2004-05-07, released 2004-08-24
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.195
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'L':
    Compound: Lysozyme C
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1t6vl_
  • Chain 'M':
    Compound: Lysozyme C
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1t6vm_
  • Chain 'N':
    Compound: novel antigen receptor
    Species: Ginglymostoma cirratum [TaxId:7801]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1t6vn_
  • Chain 'O':
    Compound: novel antigen receptor
    Species: Ginglymostoma cirratum [TaxId:7801]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1t6vo_
  • Heterogens: CL, HOH

PDB Chain Sequences:

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1t6vL (L:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
    qawirgcrl
    

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1t6vM (M:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
    qawirgcrl
    

  • Chain 'N':
    Sequence, based on SEQRES records: (download)
    >1t6vN (N:)
    arvdqtprsvtketgesltincvlrdasyalgstcwyrkksgegneesiskggryvetvn
    sgsksfslrindltvedggtyrcglgvaggycdyalcssryaecgdgtavtvn
    

    Sequence, based on observed residues (ATOM records): (download)
    >1t6vN (N:)
    rvdqtprsvtketgesltincvlrdasyalgstcwyrkksgegneesiskggryvetvns
    gsksfslrindltvedggtyrcglgvaggycdyalcssryaecgdgtavtvn
    

  • Chain 'O':
    Sequence, based on SEQRES records: (download)
    >1t6vO (O:)
    arvdqtprsvtketgesltincvlrdasyalgstcwyrkksgegneesiskggryvetvn
    sgsksfslrindltvedggtyrcglgvaggycdyalcssryaecgdgtavtvn
    

    Sequence, based on observed residues (ATOM records): (download)
    >1t6vO (O:)
    rvdqtprsvtketgesltincvlrdasyalgstcwyrkksgegneesiskggryvetvns
    gsksfslrindltvedggtyrcglgvaggycdyalcssryaecgdgtavtvn