PDB entry 1t0n
View 1t0n on RCSB PDB site
Description: Conformational switch in polymorphic H-2K molecules containing an HSV peptide
Class: immune system
Keywords: Immunoglobulin domain, MHC class I alpha domains, HSV peptide, IMMUNE SYSTEM
Deposited on
2004-04-12, released
2004-11-23
The last revision prior to the SCOPe 2.02 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.23
AEROSPACI score: 0.48
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: h-2 class I histocompatibility antigen, k-b alpha chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot P01901 (0-277)
- see remark 999 (21-23)
- see remark 999 (29)
Domains in SCOPe 2.02: d1t0na1, d1t0na2 - Chain 'B':
Compound: Beta-2-microglobulin
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1t0nb_ - Chain 'D':
Compound: h-2 class I histocompatibility antigen, k-b alpha chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot P01901 (0-277)
- see remark 999 (21-23)
- see remark 999 (29)
Domains in SCOPe 2.02: d1t0nd1, d1t0nd2 - Chain 'E':
Compound: Beta-2-microglobulin
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1t0ne_ - Chain 'P':
Compound: Glycoprotein B
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Chain 'Q':
Compound: Glycoprotein B
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1t0nA (A:)
gphslryfvtavsrpglgeprfisvgyvdntefvrfdsdaenpryeprarwmeqegpeyw
eretqkakgneqsfrvdlrtllgyynqskggshtiqvisgcevgsdgrllrgyqqyaydg
cdyialnedlktwtaadmaalitkhkweqageaerlraylegtcvewlrrylkngnatll
rtdspkahvthhsrpedkvtlrcwalgfypaditltwqlngeeliqdmelvetrpagdgt
fqkwasvvvplgkeqyytchvyhqglpepltlrweppp
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1t0nB (B:)
iqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskdw
sfyilahteftptetdtyacrvkhdsmaepktvywdrdm
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1t0nD (D:)
gphslryfvtavsrpglgeprfisvgyvdntefvrfdsdaenpryeprarwmeqegpeyw
eretqkakgneqsfrvdlrtllgyynqskggshtiqvisgcevgsdgrllrgyqqyaydg
cdyialnedlktwtaadmaalitkhkweqageaerlraylegtcvewlrrylkngnatll
rtdspkahvthhsrpedkvtlrcwalgfypaditltwqlngeeliqdmelvetrpagdgt
fqkwasvvvplgkeqyytchvyhqglpepltlrweppp
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>1t0nE (E:)
iqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskdw
sfyilahteftptetdtyacrvkhdsmaepktvywdrdm
- Chain 'P':
No sequence available.
- Chain 'Q':
No sequence available.