PDB entry 1sz9

View 1sz9 on RCSB PDB site
Description: The RNA polymerase II CTD in mRNA processing: beta-turn recognition and beta-spiral model
Class: transcription
Keywords: Pcf11, RNA polymerase II CTD interacting domain, arm repeats, TRANSCRIPTION
Deposited on 2004-04-05, released 2004-07-13
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.22
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: PCF11 protein
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: PCF11, YDR228C, YD9934.13C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P39081 (Start-143)
      • cloning artifact (140-143)
    Domains in SCOPe 2.05: d1sz9a_
  • Chain 'B':
    Compound: PCF11 protein
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: PCF11, YDR228C, YD9934.13C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P39081 (Start-143)
      • cloning artifact (140-143)
    Domains in SCOPe 2.05: d1sz9b_
  • Chain 'C':
    Compound: PCF11 protein
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: PCF11, YDR228C, YD9934.13C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P39081
      • cloning artifact (140)
    Domains in SCOPe 2.05: d1sz9c_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1sz9A (A:)
mdhdtevivkdfnsileeltfnsrpiittltklaeeniscaqyfvdaiesriekcmpkqk
lyafyaldsicknvgspytiyfsrnlfnlykrtyllvdnttrtklinmfklwlnpndtgl
plfegsalekieqflikasaaale

    Sequence, based on observed residues (ATOM records): (download) 
    >1sz9A (A:)
dhdtevivkdfnsileeltfnsrpiittltklaeeniscaqyfvdaiesriekcmpkqkl
yafyaldsicknvgspytiyfsrnlfnlykrtyllvdnttrtklinmfklwlnpndtglp
lfegsalekieqflikasaaale

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1sz9B (B:)
mdhdtevivkdfnsileeltfnsrpiittltklaeeniscaqyfvdaiesriekcmpkqk
lyafyaldsicknvgspytiyfsrnlfnlykrtyllvdnttrtklinmfklwlnpndtgl
plfegsalekieqflikasaaale

    Sequence, based on observed residues (ATOM records): (download) 
    >1sz9B (B:)
dhdtevivkdfnsileeltfnsrpiittltklaeeniscaqyfvdaiesriekcmpkqkl
yafyaldsicknvgspytiyfsrnlfnlykrtyllvdnttrtklinmfklwlnpndtglp
lfegsalekieqflikasaaale

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1sz9C (C:)
mdhdtevivkdfnsileeltfnsrpiittltklaeeniscaqyfvdaiesriekcmpkqk
lyafyaldsicknvgspytiyfsrnlfnlykrtyllvdnttrtklinmfklwlnpndtgl
plfegsalekieqflikasaaale

    Sequence, based on observed residues (ATOM records): (download) 
    >1sz9C (C:)
dhdtevivkdfnsileeltfnsrpiittltklaeeniscaqyfvdaiesriekcmpkqkl
yafyaldsicknvgspytiyfsrnlfnlykrtyllvdnttrtklinmfklwlnpndtglp
lfegsalekieqflikasaa