PDB entry 1syo

View 1syo on RCSB PDB site
Description: N-terminal 3 domains of CI-MPR bound to mannose 6-phosphate
Class: protein transport,sugar binding protein
Keywords: lectin; receptor; mannose 6-phosphate, PROTEIN TRANSPORT,SUGAR BINDING PROTEIN
Deposited on 2004-04-01, released 2004-06-29
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.228
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cation-Independent Mannose 6-phosphate receptor
    Species: Bos taurus [TaxId:9913]
    Gene: IGF2R, M6P
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1syoa1, d1syoa2, d1syoa3
  • Chain 'B':
    Compound: Cation-Independent Mannose 6-phosphate receptor
    Species: Bos taurus [TaxId:9913]
    Gene: IGF2R, M6P
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1syob1, d1syob2, d1syob3
  • Heterogens: NAG, M6P, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1syoA (A:)
aagtqgaefpelcsytweavdtknnmlykinicgnmgvaqcgpssavcmhdlktdsfhsv
gdsllktasrsllefnttvnckqqnhkiqssitflcgktlgtpefvtatdcvhyfewrtt
aackknifkankevpcyafdrelkkhdlnpliktsgaylvddsdpdtslfinvcrdievl
rasspqvrvcptgaaaclvrgdrafdvgrpqeglklvsndrlvlsyvkegagqpdfcdgh
spavtitfvcpserregtipkltaksncrfeiewvteyachrdylesrscslssaqhdva
vdlqplsrveasdslfytseadeytyylsicggsqapicnkkdaavcqvkkadstqvkva
grpqnltlrysdgdltliyfggeecssgfqrmsvinfecnqtagnngrgapvftgevdct
yfftwdtkyacv

    Sequence, based on observed residues (ATOM records): (download) 
    >1syoA (A:)
aefpelcsytweavdtknnmlykinicgnmgvaqcgpssavcmhdlktdsfhsvgdsllk
tasrsllefnttvnckqqnhkiqssitflcgktlgtpefvtatdcvhyfewrttaackkn
ifkankevpcyafdrelkkhdlnpliktsgaylvddsdpdtslfinvcrdievlrasspq
vrvcptgaaaclvrgdrafdvgrpqeglklvsndrlvlsyvkegagqpdfcdghspavti
tfvcpserregtipkltaksncrfeiewvteyachrdylesrscslssaqhdvavdlqpl
srdslfytseadeytyylsicggsqapicnkkdaavcqvkkadstqvkvagrpqnltlry
sdgdltliyfggeecssgfqrmsvinfecnqtagnngrgapvftgevdctyfftwdtkya
cv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1syoB (B:)
aagtqgaefpelcsytweavdtknnmlykinicgnmgvaqcgpssavcmhdlktdsfhsv
gdsllktasrsllefnttvnckqqnhkiqssitflcgktlgtpefvtatdcvhyfewrtt
aackknifkankevpcyafdrelkkhdlnpliktsgaylvddsdpdtslfinvcrdievl
rasspqvrvcptgaaaclvrgdrafdvgrpqeglklvsndrlvlsyvkegagqpdfcdgh
spavtitfvcpserregtipkltaksncrfeiewvteyachrdylesrscslssaqhdva
vdlqplsrveasdslfytseadeytyylsicggsqapicnkkdaavcqvkkadstqvkva
grpqnltlrysdgdltliyfggeecssgfqrmsvinfecnqtagnngrgapvftgevdct
yfftwdtkyacv

    Sequence, based on observed residues (ATOM records): (download) 
    >1syoB (B:)
aefpelcsytweavdtknnmlykinicgnmgvaqcgpssavcmhdlktdsfhsvgdsllk
tasrsllefnttvniqssitflcgktlgtpefvtatdcvhyfewrttaackknifkanke
vpcyafdrelkkhdlnpliktsgaylvddsdpdtslfinvcrdievlrasspqvrvcptg
aaaclvrgdrafdvgrpqeglklvsndrlvlsyvkfcdghspavtitfvcpserregtip
kltaksncrfeiewvteyachrdylesrscslssaqhdvavdlqplsrvslfytseadey
tyylsicggsqapicnkkdaavcqvkkadstqvkvagrpqnltlrysdgdltliyfggee
cssgfqrmsvinfecnqtagnngrgapvftgevdctyfftwdtkyacv