PDB entry 1sqv

View 1sqv on RCSB PDB site
Description: Crystal Structure Analysis of Bovine Bc1 with UHDBT
Class: oxidoreductase
Keywords: cytochrome bc1, Qo inhibitor, membrane protein, electron transport, OXIDOREDUCTASE
Deposited on 2004-03-19, released 2005-09-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-03-03, with a file datestamp of 2021-02-26.
Experiment type: XRAY
Resolution: 2.85 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ubiquinol-cytochrome C reductase complex core protein I, mitochondrial
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1sqva1, d1sqva2
  • Chain 'B':
    Compound: Ubiquinol-cytochrome C reductase complex core protein 2, mitochondrial
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1sqvb1, d1sqvb2
  • Chain 'C':
    Compound: cytochrome b
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1sqvc1, d1sqvc2
  • Chain 'D':
    Compound: Cytochrome c1, heme protein, mitochondrial
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1sqvd1, d1sqvd2
  • Chain 'E':
    Compound: ubiquinol-cytochrome c reductase iron-sulfur subunit
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1sqve1, d1sqve2
  • Chain 'F':
    Compound: Ubiquinol-cytochrome c reductase complex 14 kDa protein
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1sqvf_
  • Chain 'G':
    Compound: ubiquinol-cytochrome c reductase complex ubiquinone-binding protein qp-c
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1sqvg_
  • Chain 'H':
    Compound: Ubiquinol-cytochrome c reductase complex 11 kDa protein
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1sqvh_
  • Chain 'I':
    Compound: Ubiquinol-cytochrome C reductase complex 8 kDa protein
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1sqvi_
  • Chain 'J':
    Compound: Ubiquinol-cytochrome c reductase complex 7.2 kDa protein
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1sqvj_
  • Chain 'K':
    Compound: Ubiquinol-cytochrome c reductase complex 6.4 kDa protein
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1sqvk_
  • Heterogens: HEC, UHD, UQ2, FES, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1sqvA (A:)
tatyaqalqsvpetqvsqldnglrvaseqssqptctvgvwidagsryeseknngagyfve
hlafkgtknrpgnalekevesmgahlnaystrehtayyikalskdlpkavelladivqnc
sledsqiekerdvilqelqendtsmrdvvfnylhatafqgtplaqsvegpsenvrklsra
dlteylsrhykaprmvlaaagglehrqlldlaqkhfsglsgtydedavptlspcrftgsq
ichredglplahvaiavegpgwahpdnvalqvanaiighydctygggahlssplasiaat
nklcqsfqtfnicyadtgllgahfvcdhmsiddmmfvlqgqwmrlctsatesevlrgknl
lrnalvshldgttpvcedigrslltygrriplaewesriaevdarvvrevcskyfydqcp
avagfgpieqlpdynrirsgmfwlrf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1sqvB (B:)
slkvapkvkateapagvpphpqdleftrlpnglviaslenyapasriglfikagsryens
nnlgtshllrlasslttkgassfkitrgieavggklsvtstrenmaytveclrddvdilm
efllnvttapefrrwevaalqpqlridkavalqnpqahvienlhaaayrnalanslycpd
yrigkvtpvelhdyvqnhftsarmaliglgvshpvlkqvaeqflnirgglglsgakakyh
ggeireqngdslvhaalvaesaaigsaeanafsvlqhvlgagphvkrgsnatsslyqava
kgvhqpfdvsafnasysdsglfgfytisqaasagdvikaaynqvktiaqgnlsnpdvqaa
knklkagylmsvessegfldevgsqalaagsytppstvlqqidavadadvinaakkfvsg
rksmaasgnlghtpfidel

    Sequence, based on observed residues (ATOM records): (download) 
    >1sqvB (B:)
vpphpqdleftrlpnglviaslenyapasriglfikagsryensnnlgtshllrlasslt
tkgassfkitrgieavggklsvtstrenmaytveclrddvdilmefllnvttapefrrwe
vaalqpqlridkavalqnpqahvienlhaaayrnalanslycpdyrigkvtpvelhdyvq
nhftsarmaliglgvshpvlkqvaeqflnirgglglsgakakyhggeireqngdslvhaa
lvaesaaigsaeanafsvlqhvlgagphvkrgsnatsslyqavakgvhqpfdvsafnasy
sdsglfgfytisqaasagdvikaaynqvktiaqgnlsnpdvqaaknklkagylmsvesse
gfldevgsqalaagsytppstvlqqidavadadvinaakkfvsgrksmaasgnlghtpfi
del

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1sqvC (C:)
mtnirkshplmkivnnafidlpapsnisswwnfgsllgiclilqiltglflamhytsdtt
tafssvthicrdvnygwiirymhangasmfficlymhvgrglyygsytfletwnigvill
ltvmatafmgyvlpwgqmsfwgatvitnllsaipyigtnlvewiwggfsvdkatltrffa
fhfilpfiimaiamvhllflhetgsnnptgissdvdkipfhpyytikdilgalllilalm
llvlfapdllgdpdnytpanplntpphikpewyflfayailrsipnklggvlalafsili
lalipllhtskqrsmmfrplsqclfwalvadlltltwiggqpvehpyitigqlasvlyfl
lilvlmptagtienkllkw

    Sequence, based on observed residues (ATOM records): (download) 
    >1sqvC (C:)
tnirkshplmkivnnafidlpapsnisswwnfgsllgiclilqiltglflamhytsdttt
afssvthicrdvnygwiirymhangasmfficlymhvgrglyygsytfletwnigvilll
tvmatafmgyvlpwgqmsfwgatvitnllsaipyigtnlvewiwggfsvdkatltrffaf
hfilpfiimaiamvhllflhetgsnnptgissdvdkipfhpyytikdilgalllilalml
lvlfapdllgdpdnytpanplntpphikpewyflfayailrsipnklggvlalafsilil
alipllhtskqrsmmfrplsqclfwalvadlltltwiggqpvehpyitigqlasvlyfll
ilvlmptagtienkllkw

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1sqvD (D:)
sdlelhppsypwshrgllssldhtsirrgfqvykqvcsschsmdyvayrhlvgvcytede
akalaeevevqdgpnedgemfmrpgklsdyfpkpypnpeaaraanngalppdlsyivrar
hggedyvfslltgycepptgvslreglyfnpyfpgqaigmappiynevlefddgtpatms
qvakdvctflrwaaepehdhrkrmglkmllmmglllplvyamkrhkwsvlksrklayrpp
k

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1sqvE (E:)
shtdikvpdfsdyrrpevldstksskessearkgfsylvtatttvgvayaaknvvsqfvs
smsasadvlamskieiklsdipegknmafkwrgkplfvrhrtkkeidqeaavevsqlrdp
qhdlervkkpewviligvcthlgcvpianagdfggyycpchgshydasgrirkgpaplnl
evpsyeftsddmvivg

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1sqvF (F:)
agrpavsassrwlegirkwyynaagfnklglmrddtihenddvkeairrlpenlyddrvf
rikraldlsmrqqilpkeqwtkyeedksylepylkevirerkereewakk

    Sequence, based on observed residues (ATOM records): (download) 
    >1sqvF (F:)
vsassrwlegirkwyynaagfnklglmrddtihenddvkeairrlpenlyddrvfrikra
ldlsmrqqilpkeqwtkyeedksylepylkevirerkereewakk

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1sqvG (G:)
grqfghltrvrhvityslspfeqrafphyfskgipnvlrrtracilrvappfvafylvyt
wgtqefekskrknpaayendr

    Sequence, based on observed residues (ATOM records): (download) 
    >1sqvG (G:)
grqfghltrvrhvityslspfeqrafphyfskgipnvlrrtracilrvappfvafylvyt
wgtqefekskrknpa

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1sqvH (H:)
gdpkeeeeeeeelvdplttvreqceqlekcvkarerlelcdervssrsqteedcteelld
flhardhcvahklfnslk

    Sequence, based on observed residues (ATOM records): (download) 
    >1sqvH (H:)
elvdplttvreqceqlekcvkarerlelcdervssrsqteedcteelldflhardhcvah
klfnslk

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >1sqvI (I:)
mlsvaarsgpfapvlsatsrgvagalrplvqaavpatsespvldlkrsvlcreslrgqaa
grplvasvslnvpasvry

    Sequence, based on observed residues (ATOM records): (download) 
    >1sqvI (I:)
mlsvaarsgpfapvlsatsrgvagalrplvqaavpatsespvldlkrsvlcreslrg

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >1sqvJ (J:)
vaptltarlysllfrrtstfaltivvgalfferafdqgadaiyehinegklwkhikhkye
nk

    Sequence, based on observed residues (ATOM records): (download) 
    >1sqvJ (J:)
vaptltarlysllfrrtstfaltivvgalfferafdqgadaiyehinegklwkhikhkye
n

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >1sqvK (K:)
mltrflgpryrqlarnwvptaslwgavgavglvwatdwrlildwvpyingkfkkdd

    Sequence, based on observed residues (ATOM records): (download) 
    >1sqvK (K:)
mltrflgpryrqlarnwvptaslwgavgavglvwatdwrlildwvpyingk