SCOPe 2.06: Structural Classification of Proteins

PDB entry 1soj

View 1soj on RCSB PDB site
Description: catalytic domain of human phosphodiesterase 3b in complex with ibmx
Class: hydrolase
Keywords: pde3b phosphodiesterase, hydrolase
Deposited on 2004-03-15, released 2004-05-11
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.235
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: cGMP-inhibited 3',5'-cyclic phosphodiesterase B
Species: Homo sapiens [TaxId:9606]
Gene: PDE3B
Database cross-references and differences (RAF-indexed):
- Uniprot Q13370 (Start-419)
Domains in SCOPe 2.06: d1soja_
Chain 'B':
Compound: cGMP-inhibited 3',5'-cyclic phosphodiesterase B
Species: Homo sapiens [TaxId:9606]
Gene: PDE3B
Database cross-references and differences (RAF-indexed):
- Uniprot Q13370 (Start-419)
Domains in SCOPe 2.06: d1sojb_
Chain 'C':
Compound: cGMP-inhibited 3',5'-cyclic phosphodiesterase B
Species: Homo sapiens [TaxId:9606]
Gene: PDE3B
Database cross-references and differences (RAF-indexed):
- Uniprot Q13370 (Start-419)
Domains in SCOPe 2.06: d1sojc_
Chain 'D':
Compound: cGMP-inhibited 3',5'-cyclic phosphodiesterase B
Species: Homo sapiens [TaxId:9606]
Gene: PDE3B
Database cross-references and differences (RAF-indexed):
- Uniprot Q13370 (Start-419)
Domains in SCOPe 2.06: d1sojd_
Chain 'E':
Compound: cGMP-inhibited 3',5'-cyclic phosphodiesterase B
Species: Homo sapiens [TaxId:9606]
Gene: PDE3B
Database cross-references and differences (RAF-indexed):
- Uniprot Q13370 (Start-419)
Domains in SCOPe 2.06: d1soje_
Chain 'F':
Compound: cGMP-inhibited 3',5'-cyclic phosphodiesterase B
Species: Homo sapiens [TaxId:9606]
Gene: PDE3B
Database cross-references and differences (RAF-indexed):
- Uniprot Q13370 (Start-419)
Domains in SCOPe 2.06: d1sojf_
Chain 'G':
Compound: cGMP-inhibited 3',5'-cyclic phosphodiesterase B
Species: Homo sapiens [TaxId:9606]
Gene: PDE3B
Database cross-references and differences (RAF-indexed):
- Uniprot Q13370 (Start-419)
Domains in SCOPe 2.06: d1sojg_
Chain 'H':
Compound: cGMP-inhibited 3',5'-cyclic phosphodiesterase B
Species: Homo sapiens [TaxId:9606]
Gene: PDE3B
Database cross-references and differences (RAF-indexed):
- Uniprot Q13370 (Start-419)
Domains in SCOPe 2.06: d1sojh_
Chain 'I':
Compound: cGMP-inhibited 3',5'-cyclic phosphodiesterase B
Species: Homo sapiens [TaxId:9606]
Gene: PDE3B
Database cross-references and differences (RAF-indexed):
- Uniprot Q13370 (Start-419)
Domains in SCOPe 2.06: d1soji_
Chain 'J':
Compound: cGMP-inhibited 3',5'-cyclic phosphodiesterase B
Species: Homo sapiens [TaxId:9606]
Gene: PDE3B
Database cross-references and differences (RAF-indexed):
- Uniprot Q13370 (Start-419)
Domains in SCOPe 2.06: d1sojj_
Chain 'K':
Compound: cGMP-inhibited 3',5'-cyclic phosphodiesterase B
Species: Homo sapiens [TaxId:9606]
Gene: PDE3B
Database cross-references and differences (RAF-indexed):
- Uniprot Q13370 (Start-419)
Domains in SCOPe 2.06: d1sojk_
Chain 'L':
Compound: cGMP-inhibited 3',5'-cyclic phosphodiesterase B
Species: Homo sapiens [TaxId:9606]
Gene: PDE3B
Database cross-references and differences (RAF-indexed):
- Uniprot Q13370 (Start-419)
Domains in SCOPe 2.06: d1sojl_
Heterogens: MG, IBM, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1sojA (A:)
eqevsldlilveeydsliekmsnwnfpifelvekmgeksgrilsqvmytlfqdtglleif
kiptqqfmnyfralengyrdipyhnrihatdvlhavwylttrpvpglqqihngcgtgnet
dsdgrinhgriayisskscsnpdesygclssnipalelmalyvaaamhdydhpgrtnafl
vatnapqavlyndrsvlenhhaasawnlylsrpeynfllhldhvefkrfrflvieailat
dlkkhfdflaefnakandvnsngiewsnendrllvcqvcikladingpakvrdlhlkwte
givnefyeqgdeeanlglpispfmdrsspqlaklqesfithivgplcnsydaagllpgqw
leaeedndtesgddedgeeldtedeemennlnpkpprrksrrrifcqlmhhltenhkiwk