PDB entry 1skv

View 1skv on RCSB PDB site
Description: Crystal Structure of D-63 from Sulfolobus Spindle Virus 1
Class: Viral protein
Keywords: Sulfolobus Spindle Virus, SSV, Archaeal, Crenarchaeal, Helix-Turn-Helix, Four Helix Bundle, Viral protein
Deposited on 2004-03-05, released 2004-07-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.225
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hypothetical 7.5 kDa protein
    Species: Sulfolobus virus 1 [TaxId:244589]
    Gene: D-63
    Database cross-references and differences (RAF-indexed):
    • Uniprot P20215 (Start-62)
      • modified residue (12)
      • modified residue (36)
      • cloning artifact (63-64)
    Domains in SCOPe 2.08: d1skva1, d1skva2
  • Chain 'B':
    Compound: Hypothetical 7.5 kDa protein
    Species: Sulfolobus virus 1 [TaxId:244589]
    Gene: D-63
    Database cross-references and differences (RAF-indexed):
    • Uniprot P20215 (Start-62)
      • modified residue (12)
      • modified residue (36)
      • cloning artifact (63-65)
    Domains in SCOPe 2.08: d1skvb1, d1skvb2
  • Chain 'C':
    Compound: Hypothetical 7.5 kDa protein
    Species: Sulfolobus virus 1 [TaxId:244589]
    Gene: D-63
    Database cross-references and differences (RAF-indexed):
    • Uniprot P20215 (Start-62)
      • modified residue (12)
      • modified residue (36)
      • cloning artifact (63)
    Domains in SCOPe 2.08: d1skvc1, d1skvc2
  • Chain 'D':
    Compound: Hypothetical 7.5 kDa protein
    Species: Sulfolobus virus 1 [TaxId:244589]
    Gene: D-63
    Database cross-references and differences (RAF-indexed):
    • Uniprot P20215 (Start-62)
      • modified residue (12)
      • cloning artifact (63-65)
    Domains in SCOPe 2.08: d1skvd1, d1skvd2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1skvA (A:)
mskevlekelfemldedvrellsliheikidritgnmdkqklgkayfqvqkieaelyqli
kvshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1skvA (A:)
skevlekelfemldedvrellsliheikidritgnmdkqklgkayfqvqkieaelyqlik
vshh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1skvB (B:)
mskevlekelfemldedvrellsliheikidritgnmdkqklgkayfqvqkieaelyqli
kvshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1skvB (B:)
lekelfemldedvrellsliheikidritgnmdkqklgkayfqvqkieaelyqlikvshh
h

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1skvC (C:)
mskevlekelfemldedvrellsliheikidritgnmdkqklgkayfqvqkieaelyqli
kvshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1skvC (C:)
ekelfemldedvrellsliheikidritgnmdkqklgkayfqvqkieaelyqlikvsh

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1skvD (D:)
mskevlekelfemldedvrellsliheikidritgnmdkqklgkayfqvqkieaelyqli
kvshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1skvD (D:)
skevlekelfemldedvrellsliheikkqklgkayfqvqkieaelyqlikvshhh