PDB entry 1sds

View 1sds on RCSB PDB site
Description: Structure of protein L7Ae bound to a K-turn derived from an archaeal box H/ACA sRNA
Class: protein/RNA complex
Keywords: Protein-RNA complex
Deposited on 2004-02-13, released 2004-05-18
The last revision prior to the SCOP 1.73 freeze date was dated 2004-05-18, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.207
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 50S ribosomal protein L7Ae
    Species: Methanococcus jannaschii
    Gene: RPL7AE, MJ1203
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1sdsa_
  • Chain 'B':
    Compound: 50S ribosomal protein L7Ae
    Species: Methanococcus jannaschii
    Gene: RPL7AE, MJ1203
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1sdsb_
  • Chain 'C':
    Compound: 50S ribosomal protein L7Ae
    Species: Methanococcus jannaschii
    Gene: RPL7AE, MJ1203
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1sdsc_
  • Chain 'D':
    Compound: box H/ACA sRNA
  • Chain 'E':
    Compound: box H/ACA sRNA
  • Chain 'F':
    Compound: box H/ACA sRNA
  • Heterogens: CA, K, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1sdsA (A:)
mavyvkfkvpeeiqkelldavakaqkikkganevtkavergiaklviiaedvkpeevvah
lpylceekgipyayvaskqdlgkaaglevaassvaiinegdaeelkvliekvnvlkq

    Sequence, based on observed residues (ATOM records): (download) 
    >1sdsA (A:)
avyvkfkvpeeiqkelldavakaqkikkganevtkavergiaklviiaedvkpeevvahl
pylceekgipyayvaskqdlgkaaglevaassvaiinegdaeelkvliekvnvlk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1sdsB (B:)
mavyvkfkvpeeiqkelldavakaqkikkganevtkavergiaklviiaedvkpeevvah
lpylceekgipyayvaskqdlgkaaglevaassvaiinegdaeelkvliekvnvlkq

    Sequence, based on observed residues (ATOM records): (download) 
    >1sdsB (B:)
fkvpeeiqkelldavakaqkikkganevtkavergiaklviiaedvkpeevvahlpylce
ekgipyayvaskqdlgkaaglevaassvaiinegdaeelkvliekvnvl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1sdsC (C:)
mavyvkfkvpeeiqkelldavakaqkikkganevtkavergiaklviiaedvkpeevvah
lpylceekgipyayvaskqdlgkaaglevaassvaiinegdaeelkvliekvnvlkq

    Sequence, based on observed residues (ATOM records): (download) 
    >1sdsC (C:)
vkfkvpeeiqkelldavakaqkikkganevtkavergiaklviiaedvkpeevvahlpyl
ceekgipyayvaskqdlgkaaglevaassvaiinegdaeelkvliekvnvlk

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.