PDB entry 1sdd

View 1sdd on RCSB PDB site
Description: Crystal Structure of Bovine Factor Vai
Class: blood clotting
Keywords: coagulation, copper-binding protein, cofactor, blood clotting
Deposited on 2004-02-13, released 2004-06-29
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.252
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Coagulation factor V
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1sdda1, d1sdda2
  • Chain 'B':
    Compound: Coagulation factor V
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1sddb1, d1sddb2, d1sddb3, d1sddb4
  • Heterogens: NAG, NDG, CU, CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1sddA (A:)
aklrqfyvaaqsirwnyrpesthlsskpfetsfkkivyreyeayfqkekpqsrtsgllgp
tlyaevgdimkvhfknkahkplsihaqgikyskfsegasysdhtlpmekmddavapgqey
tyewiisehsgpthddppclthiyysyvnlvedfnsgligpllickkgtltedgtqkmfe
kqhvlmfavfdeskswnqtsslmytvngyvngtmpditvcahdhiswhligmssgpelfs
ihfngqvleqnhhkisaitlvsatsttanmtvspegrwtiasliprhfqagmqayidikn
cakktr

    Sequence, based on observed residues (ATOM records): (download) 
    >1sddA (A:)
aklrqfyvaaqsirwntsfkkivyreyeayfqkekpqsrtsgllgptlyaevgdimkvhf
knkahkplsihaqgikyskfsegasysdhtlpmekmddavapgqeytyewiisehsgpth
ddppclthiyysyvnlvedfnsgligpllickkgtltedgtqkmfekqhvlmfavfdesk
swnqtsslmytvngyvngtmpditvcahligmssgpelfsihfngqvleqnhhkisaitl
vsatsttgrwtiasliprhfqagmqayi

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1sddB (B:)
sntgnrkyyyiaaeeiswdyskfvqsddvdyvpedtvykkvvfrkyldstftkldpqgey
eehlgilgpviraevddviqvrfknlasrpyslhahglsyekssegktyeddspewfked
naiqpnktytyvwhattrsgpenpgsacrawayysavnpekdihsgligpllicrkgtld
ketnmpvdmrefvllfmvfdekkswyydkkptrswrrassevknshefhaingmiynlpg
lrmyeqewvrlhllnlggsrdihvvhfhgqtllengtqqhqlgvwpllpgsfktlemkas
kpgwwlldtevgeiqragmqtpflivdreckmpmglstgliadsqiqasefwgywepkla
rlnnggsynawiaeklstefnpepwiqvdmqkevlltgiqtqgakhylkpyyttefcvay
sldrknwrifkgnstrnvmyfggnsdastikenqidppvvaryirisptgsynkpalrle
lqgcevngcstplgmesgkienkqitassfkkswwgnywepflarlnaqgrvnawqakan
nnnqwlqidllkikkitaivtqgckslssemyvksytihysdqgtdwkpyrekssmvdki
fegnnnvrghvknffnppiisrfiriipktwnqsialrlelfgcdmy

    Sequence, based on observed residues (ATOM records): (download) 
    >1sddB (B:)
ntgnrkyyyiaaeeiswdyskfvpedtvykkvvfrkyldstftkldpqgeyeehlgilgp
viraevddviqvrfknlasrpyslhahglsnaiqpnktytyvwhattrsgpenpgsacra
wayysavnpekdihsgligpllicrkgtldketnmpvdmrefvllfmvfdekkswyydns
hefhaingmiynlpglrmyeqewvrlhllnlggsrdihvvhfhgqtllengtqqhqlgvw
pllpgsfktlemkaskpgwwlldtevgeiqragmqtpflivdreckmpmglstgliadsq
iqasefwgywepklarlnnggsynawiaeklstefnpepwiqvdmqkevlltgiqtqgak
hylkpyyttefcvaysldrknwrifkgnstrnvmyfggnsdastikenqidppvvaryir
isptgsynkpalrlelqgcevngcstplgmesgkienkqitassfkkswwgnywepflar
lnaqgrvnawqakannnnqwlqidllkikkitaivtqgckslssemyvksytihysdqgt
dwkpyrekssmvdkifegnnnvrghvknffnppiisrfiriipktwnqsialrlelfgcd
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