PDB entry 1sbk

View 1sbk on RCSB PDB site
Description: x-ray structure of ydii_ecoli northeast structural genomics consortium target er29.
Class: structural genomics, unknown function
Keywords: er29, YDII, Structural Genomics, PSI, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG
Deposited on 2004-02-10, released 2004-02-24
The last revision prior to the SCOP 1.73 freeze date was dated 2005-01-25, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.223
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hypothetical protein ydiI
    Species: Escherichia coli
    Gene: YDII, B1686
    Database cross-references and differences (RAF-indexed):
    • Uniprot P77781 (0-135)
      • modified residue (0)
      • modified residue (14)
      • modified residue (19)
      • modified residue (39)
      • cloning artifact (136-137)
    Domains in SCOP 1.73: d1sbka_
  • Chain 'B':
    Compound: Hypothetical protein ydiI
    Species: Escherichia coli
    Gene: YDII, B1686
    Database cross-references and differences (RAF-indexed):
    • Uniprot P77781 (0-135)
      • modified residue (0)
      • modified residue (14)
      • modified residue (19)
      • modified residue (39)
      • cloning artifact (136-137)
    Domains in SCOP 1.73: d1sbkb_
  • Chain 'C':
    Compound: Hypothetical protein ydiI
    Species: Escherichia coli
    Gene: YDII, B1686
    Database cross-references and differences (RAF-indexed):
    • Uniprot P77781 (0-135)
      • modified residue (0)
      • modified residue (14)
      • modified residue (19)
      • modified residue (39)
      • cloning artifact (136-137)
    Domains in SCOP 1.73: d1sbkc_
  • Chain 'D':
    Compound: Hypothetical protein ydiI
    Species: Escherichia coli
    Gene: YDII, B1686
    Database cross-references and differences (RAF-indexed):
    • Uniprot P77781 (0-135)
      • modified residue (0)
      • modified residue (14)
      • modified residue (19)
      • modified residue (39)
      • cloning artifact (136-137)
    Domains in SCOP 1.73: d1sbkd_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1sbkA (A:)
miwkrkitlealnamgegnmvgfldirfehigddtleatmpvdsrtkqpfgllhggasvv
laesigsvagylctegeqkvvgleinanhvrsaregrvrgvckplhlgsrhqvwqieifd
ekgrlccssrlttaillehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1sbkA (A:)
miwkrkitlealnamgegnmvgfldirfehigddtleatmpvdsrtkqpfgllhggasvv
laesigsvagylctegeqkvvgleinanhvrsaregrvrgvckplhlgsrhqvwqieifd
ekgrlccssrlttaille

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1sbkB (B:)
miwkrkitlealnamgegnmvgfldirfehigddtleatmpvdsrtkqpfgllhggasvv
laesigsvagylctegeqkvvgleinanhvrsaregrvrgvckplhlgsrhqvwqieifd
ekgrlccssrlttaillehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1sbkB (B:)
miwkrkitlealnamgegnmvgfldirfehigddtleatmpvdsrtkqpfgllhggasvv
laesigsvagylctegeqkvvgleinanhvrsaregrvrgvckplhlgsrhqvwqieifd
ekgrlccssrlttaille

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1sbkC (C:)
miwkrkitlealnamgegnmvgfldirfehigddtleatmpvdsrtkqpfgllhggasvv
laesigsvagylctegeqkvvgleinanhvrsaregrvrgvckplhlgsrhqvwqieifd
ekgrlccssrlttaillehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1sbkC (C:)
miwkrkitlealnamgegnmvgfldirfehigddtleatmpvdsrtkqpfgllhggasvv
laesigsvagylctegeqkvvgleinanhvrsaregrvrgvckplhlgsrhqvwqieifd
ekgrlccssrlttaille

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1sbkD (D:)
miwkrkitlealnamgegnmvgfldirfehigddtleatmpvdsrtkqpfgllhggasvv
laesigsvagylctegeqkvvgleinanhvrsaregrvrgvckplhlgsrhqvwqieifd
ekgrlccssrlttaillehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1sbkD (D:)
miwkrkitlealnamgegnmvgfldirfehigddtleatmpvdsrtkqpfgllhggasvv
laesigsvagylctegeqkvvgleinanhvrsaregrvrgvckplhlgsrhqvwqieifd
ekgrlccssrlttaille