PDB entry 1sbb
View 1sbb on RCSB PDB site
Description: T-cell receptor beta chain complexed with superantigen seb
Class: immune system
Keywords: t cell receptor, superantigen, complex, immune system
Deposited on
1999-02-22, released
1999-03-01
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.228
AEROSPACI score: 0.3
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: protein (14.3.d t cell antigen receptor)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- GB U83243 (0-237)
- engineered mutation (21)
- engineered mutation (70)
- insertion (95-97)
- engineered mutation (116)
Domains in SCOPe 2.06: d1sbba1, d1sbba2 - Chain 'B':
Compound: protein (staphylococcal enterotoxin b)
Species: Staphylococcus aureus [TaxId:1280]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1sbbb1, d1sbbb2 - Chain 'C':
Compound: protein (14.3.d t cell antigen receptor)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- GB U83243 (0-237)
- engineered mutation (21)
- engineered mutation (70)
- insertion (95-97)
- engineered mutation (116)
Domains in SCOPe 2.06: d1sbbc1, d1sbbc2 - Chain 'D':
Compound: protein (staphylococcal enterotoxin b)
Species: Staphylococcus aureus [TaxId:1280]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1sbbd1, d1sbbd2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1sbbA (A:)
avtqsprnkvavtggkvtlscqqtnnhnnmywyrqdtghglrlihysygagstekgdipd
gykasrpsqeqfslilelatpsqtsvyfcasgggrgsyaeqffgpgtrltvledlrqvtp
pkvslfepskaeiankqkatlvclargffpdhvelswwvngkevhsgvstdpqaykesny
syclssrlrvsatfwhnprnhfrcqvqfhglseedkwpegspkpvtqnisaeawgrad
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1sbbB (B:)
esqpdpkpdelhksskftglmenmkvlyddnhvsainvksidqflyfdliysikdtklgn
ydnvrvefknkdladkykdkyvdvfganyyyqcyfskktndinshqtdkrktcmyggvte
hngnqldkyrsitvrvfedgknllsfdvqtnkkkvtaqeldyltrhylvknkklyefnns
pyetgyikfienensfwydmmpapgdkfdqskylmmyndnkmvdskdvkievylttkkk
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1sbbC (C:)
avtqsprnkvavtggkvtlscqqtnnhnnmywyrqdtghglrlihysygagstekgdipd
gykasrpsqeqfslilelatpsqtsvyfcasgggrgsyaeqffgpgtrltvledlrqvtp
pkvslfepskaeiankqkatlvclargffpdhvelswwvngkevhsgvstdpqaykesny
syclssrlrvsatfwhnprnhfrcqvqfhglseedkwpegspkpvtqnisaeawgrad
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1sbbD (D:)
esqpdpkpdelhksskftglmenmkvlyddnhvsainvksidqflyfdliysikdtklgn
ydnvrvefknkdladkykdkyvdvfganyyyqcyfskktndinshqtdkrktcmyggvte
hngnqldkyrsitvrvfedgknllsfdvqtnkkkvtaqeldyltrhylvknkklyefnns
pyetgyikfienensfwydmmpapgdkfdqskylmmyndnkmvdskdvkievylttkkk
Sequence, based on observed residues (ATOM records): (download)
>1sbbD (D:)
esqpdpkpdelhksskftglmenmkvlyddnhvsainvksidqflyfdliysikdtklgn
ydnvrvefknkdladkykdkyvdvfganyyyqcyfskktshqtdkrktcmyggvtehngn
qldkyrsitvrvfedgknllsfdvqtnkkkvtaqeldyltrhylvknkklyefnnspyet
gyikfienensfwydmmpapgdkfdqskylmmyndnkmvdskdvkievylttkkk