PDB entry 1s9r

View 1s9r on RCSB PDB site
Description: crystal structure of arginine deiminase covalently linked with a reaction intermediate
Class: hydrolase
Keywords: deiminase, hydrolase, 5-fold pseudo-symmetric domain, 5-helix bundle domain, raction intermediate
Deposited on 2004-02-05, released 2004-04-13
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.168
AEROSPACI score: 0.6 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Arginine deiminase
    Species: Mycoplasma arginini [TaxId:2094]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1s9ra_
  • Chain 'B':
    Compound: Arginine deiminase
    Species: Mycoplasma arginini [TaxId:2094]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1s9rb_
  • Heterogens: ARG, TRS, UNX, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1s9rA (A:)
    msvfdskfkgihvyseigelesvlvhepgreidyitparldellfsaileshdarkehkq
    fvaelkandinvvelidlvaetydlasqeakdklieefledsepvlseehkvvvrnflka
    kktsrelveimmagitkydlgieadhelivdpmpnlyftrdpfasvgngvtihymrykvr
    qretlfsrfvfsnhpklintpwyydpslklsieggdvfiynndtlvvgvsertdlqtvtl
    laknivankecefkrivainvpkwtnlmhldtwltmldkdkflyspiandvfkfwdydlv
    nggaepqpvenglplegllqsiinkkpvlipiagegasqmeierethfdgtnylairpgv
    vigysrnektnaaleaagikvlpfhgnqlslgmgnarcmsmplsrkdvkw
    

    Sequence, based on observed residues (ATOM records): (download)
    >1s9rA (A:)
    svfdskfkgihvyseigelesvlvhepgreidyitparldellfsaileshdarkehkqf
    vaelkandinvvelidlvaetydlasqeakdklieefledsepvlseehkvvvrnflkak
    ktsrelveimmagitkydlgieadhelivdpmpnlyftrdpfasvgngvtihymrykvrq
    retlfsrfvfsnhpklintpwyydpslklsieggdvfiynndtlvvgvsertdlqtvtll
    aknivankecefkrivainvpkwtnlmhldtwltmldkdkflyspiandvfkfwdydlvn
    ggaepqpvenglplegllqsiinkkpvlipiagegasqmeierethfdgtnylairpgvv
    igysrnektnaaleaagikvlpfhgnqlslgmgnarcmsmplsrkdvkw
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1s9rB (B:)
    msvfdskfkgihvyseigelesvlvhepgreidyitparldellfsaileshdarkehkq
    fvaelkandinvvelidlvaetydlasqeakdklieefledsepvlseehkvvvrnflka
    kktsrelveimmagitkydlgieadhelivdpmpnlyftrdpfasvgngvtihymrykvr
    qretlfsrfvfsnhpklintpwyydpslklsieggdvfiynndtlvvgvsertdlqtvtl
    laknivankecefkrivainvpkwtnlmhldtwltmldkdkflyspiandvfkfwdydlv
    nggaepqpvenglplegllqsiinkkpvlipiagegasqmeierethfdgtnylairpgv
    vigysrnektnaaleaagikvlpfhgnqlslgmgnarcmsmplsrkdvkw
    

    Sequence, based on observed residues (ATOM records): (download)
    >1s9rB (B:)
    svfdskfkgihvyseigelesvlvhepgreidyitparldellfsaileshdarkehkqf
    vaelkandinvvelidlvaetydlasqeakdklieefledsepvlseehkvvvrnflkak
    ktsrelveimmagitkydlgieadhelivdpmpnlyftrdpfasvgngvtihymrykvrq
    retlfsrfvfsnhpklintpwyydpslklsieggdvfiynndtlvvgvsertdlqtvtll
    aknivankecefkrivainvpkwtnlmhldtwltmldkdkflyspiandvfkfwdydlvn
    ggaepqpvenglplegllqsiinkkpvlipiagegasqmeierethfdgtnylairpgvv
    igysrnektnaaleaagikvlpfhgnqlslgmgnarcmsmplsrkdvkw