PDB entry 1s8j

View 1s8j on RCSB PDB site
Description: Nitrate-bound D85S mutant of bacteriorhodopsin
Class: membrane protein
Keywords: bacteriorhodopsin, anion, pump, x-ray diffraction
Deposited on 2004-02-02, released 2004-06-08
The last revision prior to the SCOP 1.73 freeze date was dated 2004-06-08, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.219
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Bacteriorhodopsin precursor
    Species: Halobacterium sp.
    Gene: BOP, VNG1467G
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02945
      • engineered (84)
    Domains in SCOP 1.73: d1s8ja_
  • Heterogens: NO3, RET, LI1, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1s8jA (A:)
qaqitgrpewiwlalgtalmglgtlyflvkgmgvsdpdakkfyaittlvpaiaftmylsm
llgygltmvpfggeqnpiywaryaswlfttplllldlallvdadqgtilalvgadgimig
tglvgaltkvysyrfvwwaistaamlyilyvlffgftskaesmrpevastfkvlrnvtvv
lwsaypvvwligsegagivplnietllfmvldvsakvgfglillrsraifgeaeapepsa
gdgaaatsd

    Sequence, based on observed residues (ATOM records): (download) 
    >1s8jA (A:)
itgrpewiwlalgtalmglgtlyflvkgmgvsdpdakkfyaittlvpaiaftmylsmllg
yiywaryaswlfttplllldlallvdadqgtilalvgadgimigtglvgaltkvysyrfv
wwaistaamlyilyvlffgftskaesmrpevastfkvlrnvtvvlwsaypvvwligsega
givplnietllfmvldvsakvgfglillrsraifge