PDB entry 1s0n

View 1s0n on RCSB PDB site
Description: Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift
Class: transferase/DNA
Keywords: abasic lesion, LESION BYPASS, POLYMERASE, TRANSFERASE-DNA COMPLEX
Deposited on 2003-12-31, released 2004-03-30
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.238
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase IV
    Species: SULFOLOBUS SOLFATARICUS [TaxId:273057]
    Gene: DPO4
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1s0na1, d1s0na2
  • Chain 'P':
    Compound: 5'-d(*gp*gp*cp*ap*cp*tp*gp*ap*tp*cp*ap*cp*g)-3'
  • Chain 'T':
    Compound: 5'-d(*tp*ap*cp*gp*ap*cp*gp*tp*gp*ap*tp*cp*ap*gp*tp*gp*cp*c)-3'
  • Heterogens: CA, DCP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1s0nA (A:)
mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagip
iveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyre
aynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldi
advpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtr
vrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgr
tfphgisketaysesvkllqkileederkirrigvrfskfieaigldkffdt

    Sequence, based on observed residues (ATOM records): (download) 
    >1s0nA (A:)
mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagip
iveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyre
aynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldi
advpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtr
vrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgr
tfphgisketaysesvkllqkileederkirrigvrfskfi

  • Chain 'P':
    No sequence available.

  • Chain 'T':
    No sequence available.