PDB entry 1rzo

View 1rzo on RCSB PDB site
Description: Agglutinin from Ricinus communis with galactoaza
Class: hydrolase
Keywords: ribosome-inactivating protein, immunotoxin, agglutinin ricin, hydrolase
Deposited on 2003-12-26, released 2004-12-28
The last revision prior to the SCOPe 2.01 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.63 Å
R-factor: 0.225
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: agglutinin
    Species: Ricinus communis [TaxId:3988]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1rzoa_
  • Chain 'B':
    Compound: agglutinin
    Species: Ricinus communis [TaxId:3988]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1rzob1, d1rzob2
  • Chain 'C':
    Compound: agglutinin
    Species: Ricinus communis [TaxId:3988]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1rzoc_
  • Chain 'D':
    Compound: agglutinin
    Species: Ricinus communis [TaxId:3988]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1rzod1, d1rzod2
  • Heterogens: GAL, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1rzoA (A:)
ifpkqypiinfttadatvesytnfiravrshlttgadvrheipvlpnrvglpisqrfilv
elsnhaelsvtlaldvtnayvvgcragnsayffhpdnqedaeaithlftdvqnsftfafg
gnydrleqlgglrenielgtgpledaisalyyystcgtqiptlarsfmvciqmiseaarf
qyiegemrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngskfn
vydvsilipiialmvyrcappp

    Sequence, based on observed residues (ATOM records): (download) 
    >1rzoA (A:)
kqypiinfttadatvesytnfiravrshlttgadvrheipvlpnrvglpisqrfilvels
nhaelsvtlaldvtnayvvgcragnsayffhpdnqedaeaithlftdvqnsftfafggny
drleqlgglrenielgtgpledaisalyyystcgtqiptlarsfmvciqmiseaarfqyi
egemrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngskfnvyd
vsilipiialmvyrcappp

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1rzoB (B:)
advcmdpepivrivgrnglcvdvtgeeffdgnpiqlwpcksntdwnqlwtlrkdstirsn
gkcltiskssprqqvviyncstatvgatrwqiwdnrtiinprsglvlaatsgnsgtkltv
qtniyavsqgwlptnntqpfvttivglygmclqansgkvwledctsekaeqqwalyadgs
irpqqnrdnclttdanikgtvvkilscgpassgqrwmfkndgtilnlynglvldvrrsdp
slkqiivhpfhgnlnqiwlplf

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1rzoC (C:)
ifpkqypiinfttadatvesytnfiravrshlttgadvrheipvlpnrvglpisqrfilv
elsnhaelsvtlaldvtnayvvgcragnsayffhpdnqedaeaithlftdvqnsftfafg
gnydrleqlgglrenielgtgpledaisalyyystcgtqiptlarsfmvciqmiseaarf
qyiegemrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngskfn
vydvsilipiialmvyrcappp

    Sequence, based on observed residues (ATOM records): (download) 
    >1rzoC (C:)
pkqypiinfttadatvesytnfiravrshlttgadvrheipvlpnrvglpisqrfilvel
snhaelsvtlaldvtnayvvgcragnsayffhpdnqedaeaithlftdvqnsftfafggn
ydrleqlgglrenielgtgpledaisalyyystcgtqiptlarsfmvciqmiseaarfqy
iegemrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngskfnvy
dvsilipiialmvyrcappp

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1rzoD (D:)
advcmdpepivrivgrnglcvdvtgeeffdgnpiqlwpcksntdwnqlwtlrkdstirsn
gkcltiskssprqqvviyncstatvgatrwqiwdnrtiinprsglvlaatsgnsgtkltv
qtniyavsqgwlptnntqpfvttivglygmclqansgkvwledctsekaeqqwalyadgs
irpqqnrdnclttdanikgtvvkilscgpassgqrwmfkndgtilnlynglvldvrrsdp
slkqiivhpfhgnlnqiwlplf