PDB entry 1rrq

View 1rrq on RCSB PDB site
Description: MutY adenine glycosylase in complex with DNA containing an A:oxoG pair
Class: hydrolase/DNA
Keywords: DNA repair, DNA glycosylase, 8-oxoguanine, protein-DNA complex, HYDROLASE/DNA COMPLEX
Deposited on 2003-12-08, released 2004-02-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-03-31, with a file datestamp of 2009-03-27.
Experiment type: XRAY
Resolution: 2.22 Å
R-factor: 0.226
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: MutY
    Species: Geobacillus stearothermophilus [TaxId:1422]
    Gene: mutY
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1rrqa1, d1rrqa2
  • Chain 'B':
    Compound: 5'-d(ap*ap*gp*ap*cp*(8og)p*tp*gp*gp*ap*c)-3'
  • Chain 'C':
    Compound: 5'-d(*tp*gp*tp*cp*cp*ap*ap*gp*tp*cp*t)-3'
  • Heterogens: CA, SF4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1rrqA (A:)
    gshmtreterfparefqrdlldwfarerrdlpwrkdrdpykvwvsevmlqqtrvetvipy
    feqfidrfptlealadadedevlkaweglgyysrvrnlhaavkevktryggkvpddpdef
    srlkgvgpytvgavlslaygvpepavngnvmrvlsrlflvtddiakcstrkrfeqivrei
    mayenpgafnealielgalvctprrpscllcpvqaycqafaegvaeelpvkmkktavkqv
    plavavladdegrvlirkrdstgllanlwefpscetdgadgkekleqmvgeqyglqvelt
    epivsfehafshlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreyke
    wasgvrppp
    

    Sequence, based on observed residues (ATOM records): (download)
    >1rrqA (A:)
    parefqrdlldwfarerrdlpwrkdrdpykvwvsevmlqqtrvetvipyfeqfidrfptl
    ealadadedevlkaweglgyysrvrnlhaavkevktryggkvpddpdefsrlkgvgpytv
    gavlslaygvpepavngnvmrvlsrlflvtddiakcstrkrfeqivreimayenpgafne
    alielgalvctprrpscllcpvqaycqafaegvaeelpvkmvkqvplavavladdegrvl
    irkrdstgllanlwefpscetdgadgkekleqmvglqveltepivsfehafshlvwqltv
    fpgrlvhggpveepyrlapedelkayafpvshqrvwreykewas
    

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.