PDB entry 1rhz
View 1rhz on RCSB PDB site
Description: The structure of a protein conducting channel
Class: protein transport
Keywords: Protein translocation, SecY, Membrane Protein, Protein Channels, protein transport
Deposited on
2003-11-15, released
2004-01-06
The last revision prior to the SCOPe 2.05 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 3.5 Å
R-factor: 0.254
AEROSPACI score: 0.11
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Preprotein translocase secY subunit
Species: Methanocaldococcus jannaschii [TaxId:2190]
Gene: SECY, MJ0478
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1rhza_ - Chain 'B':
Compound: Preprotein translocase secE subunit
Species: Methanocaldococcus jannaschii [TaxId:2190]
Gene: SECE, MJ0371
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1rhzb_ - Chain 'C':
Compound: SecBeta
Species: Methanocaldococcus jannaschii [TaxId:2190]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1rhzc_
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1rhzA (A:)
mkklipilekipevelpvkeitfkeklkwtgivlvlyfimgcidvytagaqipaifefwq
titasrigtlitlgigpivtagiimqllvgsgiiqmdlsipenralfqgcqkllsiimcf
veavlfvgagafgiltpllaflviiqiafgsiiliyldeivskygigsgiglfiaagvsq
tifvgalgpegylwkflnsliqgvpnieyiapiigtiivflmvvyaecmrveiplahgri
kgavgkypikfvyvsnipvilaaalfaniqlwglalyrmgipilghyeggravdgiayyl
stpyglssvisdpihaivymiamiitcvmfgifwvettgldpksmakrigslgmaikgfr
ksekaiehrlkryippltvmssafvgflatianfigalgggtgvlltvsivyrmyeqllr
ekvselhpaiakllnk
Sequence, based on observed residues (ATOM records): (download)
>1rhzA (A:)
kklipilekipevelpvkeitfkeklkwtgivlvlyfimgcidvytagaqipaifefwqt
itasrigtlitlgigpivtagiimqllvgsgiiqmdlsipenralfqgcqkllsiimcfv
eavlfvgagafgiltpllaflviiqiafgsiiliyldeivskygigsgiglfiaagvsqt
ifvgalgpegylwkflnsliqgvpnieyiapiigtiivflmvvyaecmrveiplahgrik
gavgkypikfvyvsnipvilaaalfaniqlwglalyrmgipilghyeggravdgiayyls
tpyglssvisdpihaivymiamiitcvmfgifwvettgldpksmakrigslgmaikgfrk
sekaiehrlkryippltvmssafvgflatianfigalgggtgvlltvsivyrmyeqllre
kvselhpaiakl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1rhzB (B:)
mktdfnqkieqlkefieecrrvwlvlkkptkdeylavakvtalgisllgiigyiihvpat
yikgilkppttprv
Sequence, based on observed residues (ATOM records): (download)
>1rhzB (B:)
tdfnqkieqlkefieecrrvwlvlkkptkdeylavakvtalgisllgiigyiihvpatyi
kgilk
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1rhzC (C:)
mskreetglatsaglirymdetfskirvkpehvigvtvafviieailtygrfl
Sequence, based on observed residues (ATOM records): (download)
>1rhzC (C:)
etfskirvkpehvigvtvafviieailtygrf