PDB entry 1rfm

View 1rfm on RCSB PDB site
Description: Sulfolactate Dehydrogenase from Methanocaldococcus jannaschii
Class: oxidoreductase
Keywords: methanogens, coenzyme M, dehydrogenase, hyperthermostable, pro-S hydrogen transfer, NAD-binding without a Rossmann fold, oxidoreductase
Deposited on 2003-11-10, released 2004-03-16
The last revision prior to the SCOP 1.75 freeze date was dated 2008-05-13, with a file datestamp of 2008-05-09.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.199
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: l-sulfolactate dehydrogenase
    Species: Methanococcus jannaschii
    Gene: COMC, MDH, MJ1425
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1rfma_
  • Chain 'B':
    Compound: l-sulfolactate dehydrogenase
    Species: Methanococcus jannaschii
    Gene: COMC, MDH, MJ1425
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1rfmb_
  • Chain 'C':
    Compound: l-sulfolactate dehydrogenase
    Species: Methanococcus jannaschii
    Gene: COMC, MDH, MJ1425
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1rfmc_
  • Chain 'D':
    Compound: l-sulfolactate dehydrogenase
    Species: Methanococcus jannaschii
    Gene: COMC, MDH, MJ1425
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1rfmd_
  • Chain 'E':
    Compound: l-sulfolactate dehydrogenase
    Species: Methanococcus jannaschii
    Gene: COMC, MDH, MJ1425
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1rfme_
  • Chain 'F':
    Compound: l-sulfolactate dehydrogenase
    Species: Methanococcus jannaschii
    Gene: COMC, MDH, MJ1425
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1rfmf_
  • Chain 'G':
    Compound: l-sulfolactate dehydrogenase
    Species: Methanococcus jannaschii
    Gene: COMC, MDH, MJ1425
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1rfmg_
  • Chain 'H':
    Compound: l-sulfolactate dehydrogenase
    Species: Methanococcus jannaschii
    Gene: COMC, MDH, MJ1425
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1rfmh_
  • Heterogens: NAD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1rfmA (A:)
milkpenekkliidvlkkfgvpeedakitadvfvdadlkgftshgigrfpqyitalklgn
inpkpdikivkespatavidgdlglgqvvgkkamelaikkaknvgvgvvatrnanhfgia
gyyselamnqdmigititntepamapfggkekilgtnpiaiafkgnkykfsldmatasia
rgkilealrkkikipegcavdkdgkpttdpakalegcilpfggpkgyglalaiemlsaig
gaevgtkvkgtanpeerctkgdlfiainpeffmgkeefkrkvdelldeiknsepaegfei
lipgeieernkmkrkdgfeidknlynqlkeicnelglniedyie

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1rfmB (B:)
milkpenekkliidvlkkfgvpeedakitadvfvdadlkgftshgigrfpqyitalklgn
inpkpdikivkespatavidgdlglgqvvgkkamelaikkaknvgvgvvatrnanhfgia
gyyselamnqdmigititntepamapfggkekilgtnpiaiafkgnkykfsldmatasia
rgkilealrkkikipegcavdkdgkpttdpakalegcilpfggpkgyglalaiemlsaig
gaevgtkvkgtanpeerctkgdlfiainpeffmgkeefkrkvdelldeiknsepaegfei
lipgeieernkmkrkdgfeidknlynqlkeicnelglniedyie

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1rfmC (C:)
milkpenekkliidvlkkfgvpeedakitadvfvdadlkgftshgigrfpqyitalklgn
inpkpdikivkespatavidgdlglgqvvgkkamelaikkaknvgvgvvatrnanhfgia
gyyselamnqdmigititntepamapfggkekilgtnpiaiafkgnkykfsldmatasia
rgkilealrkkikipegcavdkdgkpttdpakalegcilpfggpkgyglalaiemlsaig
gaevgtkvkgtanpeerctkgdlfiainpeffmgkeefkrkvdelldeiknsepaegfei
lipgeieernkmkrkdgfeidknlynqlkeicnelglniedyie

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1rfmD (D:)
milkpenekkliidvlkkfgvpeedakitadvfvdadlkgftshgigrfpqyitalklgn
inpkpdikivkespatavidgdlglgqvvgkkamelaikkaknvgvgvvatrnanhfgia
gyyselamnqdmigititntepamapfggkekilgtnpiaiafkgnkykfsldmatasia
rgkilealrkkikipegcavdkdgkpttdpakalegcilpfggpkgyglalaiemlsaig
gaevgtkvkgtanpeerctkgdlfiainpeffmgkeefkrkvdelldeiknsepaegfei
lipgeieernkmkrkdgfeidknlynqlkeicnelglniedyie

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1rfmE (E:)
milkpenekkliidvlkkfgvpeedakitadvfvdadlkgftshgigrfpqyitalklgn
inpkpdikivkespatavidgdlglgqvvgkkamelaikkaknvgvgvvatrnanhfgia
gyyselamnqdmigititntepamapfggkekilgtnpiaiafkgnkykfsldmatasia
rgkilealrkkikipegcavdkdgkpttdpakalegcilpfggpkgyglalaiemlsaig
gaevgtkvkgtanpeerctkgdlfiainpeffmgkeefkrkvdelldeiknsepaegfei
lipgeieernkmkrkdgfeidknlynqlkeicnelglniedyie

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1rfmF (F:)
milkpenekkliidvlkkfgvpeedakitadvfvdadlkgftshgigrfpqyitalklgn
inpkpdikivkespatavidgdlglgqvvgkkamelaikkaknvgvgvvatrnanhfgia
gyyselamnqdmigititntepamapfggkekilgtnpiaiafkgnkykfsldmatasia
rgkilealrkkikipegcavdkdgkpttdpakalegcilpfggpkgyglalaiemlsaig
gaevgtkvkgtanpeerctkgdlfiainpeffmgkeefkrkvdelldeiknsepaegfei
lipgeieernkmkrkdgfeidknlynqlkeicnelglniedyie

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1rfmG (G:)
milkpenekkliidvlkkfgvpeedakitadvfvdadlkgftshgigrfpqyitalklgn
inpkpdikivkespatavidgdlglgqvvgkkamelaikkaknvgvgvvatrnanhfgia
gyyselamnqdmigititntepamapfggkekilgtnpiaiafkgnkykfsldmatasia
rgkilealrkkikipegcavdkdgkpttdpakalegcilpfggpkgyglalaiemlsaig
gaevgtkvkgtanpeerctkgdlfiainpeffmgkeefkrkvdelldeiknsepaegfei
lipgeieernkmkrkdgfeidknlynqlkeicnelglniedyie

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1rfmH (H:)
milkpenekkliidvlkkfgvpeedakitadvfvdadlkgftshgigrfpqyitalklgn
inpkpdikivkespatavidgdlglgqvvgkkamelaikkaknvgvgvvatrnanhfgia
gyyselamnqdmigititntepamapfggkekilgtnpiaiafkgnkykfsldmatasia
rgkilealrkkikipegcavdkdgkpttdpakalegcilpfggpkgyglalaiemlsaig
gaevgtkvkgtanpeerctkgdlfiainpeffmgkeefkrkvdelldeiknsepaegfei
lipgeieernkmkrkdgfeidknlynqlkeicnelglniedyie