SCOPe 2.08: Structural Classification of Proteins

PDB entry 1rbl

View 1rbl on RCSB PDB site
Description: structure determination and refinement of ribulose 1,5 bisphosphate carboxylase(slash)oxygenase from synechococcus pcc6301
Class: lyase
Keywords: lyase(carbon-carbon), lyase
Deposited on 1993-05-12, released 1994-06-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.2
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: ribulose 1,5 bisphosphate carboxylase/oxygenase (large chain)
Species: SYNECHOCOCCUS ELONGATUS [TaxId:269084]
Database cross-references and differences (RAF-indexed):
- Uniprot P00880 (0-466)
  - conflict (32-33)
  - conflict (82)
  - conflict (347)
Domains in SCOPe 2.08: d1rbla1, d1rbla2
Chain 'B':
Compound: ribulose 1,5 bisphosphate carboxylase/oxygenase (large chain)
Species: SYNECHOCOCCUS ELONGATUS [TaxId:269084]
Database cross-references and differences (RAF-indexed):
- Uniprot P00880 (0-466)
  - conflict (32-33)
  - conflict (82)
  - conflict (347)
Domains in SCOPe 2.08: d1rblb1, d1rblb2
Chain 'C':
Compound: ribulose 1,5 bisphosphate carboxylase/oxygenase (large chain)
Species: SYNECHOCOCCUS ELONGATUS [TaxId:269084]
Database cross-references and differences (RAF-indexed):
- Uniprot P00880 (0-466)
  - conflict (32-33)
  - conflict (82)
  - conflict (347)
Domains in SCOPe 2.08: d1rblc1, d1rblc2
Chain 'D':
Compound: ribulose 1,5 bisphosphate carboxylase/oxygenase (large chain)
Species: SYNECHOCOCCUS ELONGATUS [TaxId:269084]
Database cross-references and differences (RAF-indexed):
- Uniprot P00880 (0-466)
  - conflict (32-33)
  - conflict (82)
  - conflict (347)
Domains in SCOPe 2.08: d1rbld1, d1rbld2
Chain 'E':
Compound: ribulose 1,5 bisphosphate carboxylase/oxygenase (large chain)
Species: SYNECHOCOCCUS ELONGATUS [TaxId:269084]
Database cross-references and differences (RAF-indexed):
- Uniprot P00880 (0-466)
  - conflict (32-33)
  - conflict (82)
  - conflict (347)
Domains in SCOPe 2.08: d1rble1, d1rble2
Chain 'F':
Compound: ribulose 1,5 bisphosphate carboxylase/oxygenase (large chain)
Species: SYNECHOCOCCUS ELONGATUS [TaxId:269084]
Database cross-references and differences (RAF-indexed):
- Uniprot P00880 (0-466)
  - conflict (32-33)
  - conflict (82)
  - conflict (347)
Domains in SCOPe 2.08: d1rblf1, d1rblf2
Chain 'G':
Compound: ribulose 1,5 bisphosphate carboxylase/oxygenase (large chain)
Species: SYNECHOCOCCUS ELONGATUS [TaxId:269084]
Database cross-references and differences (RAF-indexed):
- Uniprot P00880 (0-466)
  - conflict (32-33)
  - conflict (82)
  - conflict (347)
Domains in SCOPe 2.08: d1rblg1, d1rblg2
Chain 'H':
Compound: ribulose 1,5 bisphosphate carboxylase/oxygenase (large chain)
Species: SYNECHOCOCCUS ELONGATUS [TaxId:269084]
Database cross-references and differences (RAF-indexed):
- Uniprot P00880 (0-466)
  - conflict (32-33)
  - conflict (82)
  - conflict (347)
Domains in SCOPe 2.08: d1rblh1, d1rblh2
Chain 'I':
Compound: ribulose 1,5 bisphosphate carboxylase/oxygenase (small chain)
Species: SYNECHOCOCCUS ELONGATUS [TaxId:269084]
Database cross-references and differences (RAF-indexed):
- Uniprot P04716 (0-108)
  - conflict (62)
  - conflict (64-65)
  - conflict (95)
  - conflict (99)
Domains in SCOPe 2.08: d1rbli_
Chain 'J':
Compound: ribulose 1,5 bisphosphate carboxylase/oxygenase (small chain)
Species: SYNECHOCOCCUS ELONGATUS [TaxId:269084]
Database cross-references and differences (RAF-indexed):
- Uniprot P04716 (0-108)
  - conflict (62)
  - conflict (64-65)
  - conflict (95)
  - conflict (99)
Domains in SCOPe 2.08: d1rblj_
Chain 'K':
Compound: ribulose 1,5 bisphosphate carboxylase/oxygenase (small chain)
Species: SYNECHOCOCCUS ELONGATUS [TaxId:269084]
Database cross-references and differences (RAF-indexed):
- Uniprot P04716 (0-108)
  - conflict (62)
  - conflict (64-65)
  - conflict (95)
  - conflict (99)
Domains in SCOPe 2.08: d1rblk_
Chain 'L':
Compound: ribulose 1,5 bisphosphate carboxylase/oxygenase (small chain)
Species: SYNECHOCOCCUS ELONGATUS [TaxId:269084]
Database cross-references and differences (RAF-indexed):
- Uniprot P04716 (0-108)
  - conflict (62)
  - conflict (64-65)
  - conflict (95)
  - conflict (99)
Domains in SCOPe 2.08: d1rbll_
Chain 'M':
Compound: ribulose 1,5 bisphosphate carboxylase/oxygenase (small chain)
Species: SYNECHOCOCCUS ELONGATUS [TaxId:269084]
Database cross-references and differences (RAF-indexed):
- Uniprot P04716 (0-108)
  - conflict (62)
  - conflict (64-65)
  - conflict (95)
  - conflict (99)
Domains in SCOPe 2.08: d1rblm_
Chain 'N':
Compound: ribulose 1,5 bisphosphate carboxylase/oxygenase (small chain)
Species: SYNECHOCOCCUS ELONGATUS [TaxId:269084]
Database cross-references and differences (RAF-indexed):
- Uniprot P04716 (0-108)
  - conflict (62)
  - conflict (64-65)
  - conflict (95)
  - conflict (99)
Domains in SCOPe 2.08: d1rbln_
Chain 'O':
Compound: ribulose 1,5 bisphosphate carboxylase/oxygenase (small chain)
Species: SYNECHOCOCCUS ELONGATUS [TaxId:269084]
Database cross-references and differences (RAF-indexed):
- Uniprot P04716 (0-108)
  - conflict (62)
  - conflict (64-65)
  - conflict (95)
  - conflict (99)
Domains in SCOPe 2.08: d1rblo_
Chain 'P':
Compound: ribulose 1,5 bisphosphate carboxylase/oxygenase (small chain)
Species: SYNECHOCOCCUS ELONGATUS [TaxId:269084]
Database cross-references and differences (RAF-indexed):
- Uniprot P04716 (0-108)
  - conflict (62)
  - conflict (64-65)
  - conflict (95)
  - conflict (99)
Domains in SCOPe 2.08: d1rblp_
Heterogens: MG, CAP, FMT, HOH

PDB Chain Sequences:

Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)

>1rblA (A:)
saagykagvkdykltyytpdytpkdtdllaafrfspqpgvpadeagaaiaaesstgtwtt
vwtdlltdmdrykgkcyhiepvageensyfafiaypldlfeegsvtniltsivgnvfgfk
airslrledirfpvalvktfqgpphgiqverdllnkygrpmlgctikpklglsaknygra
vyeclrggldftkddeninsqpfqrwrdrflfvadaihksqaetgeikghylnvtaptce
emmkraefakelgmpiimhdfltagftanttlakwcrdngvllhihramhavidrqrnhg
ihfrvlakclrlsggdhlhsgtvvgklegdkastlgfvdlmredhieadrsrgvfftqdw
asmpgvlpvasggihvwhmpalveifgddsvlqfgggtlghpwgnapgatanrvaleacv
qarnegrdlyreggdilreagkwspelaaaldlwkeikfefetmdkl

Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)

>1rblB (B:)
saagykagvkdykltyytpdytpkdtdllaafrfspqpgvpadeagaaiaaesstgtwtt
vwtdlltdmdrykgkcyhiepvageensyfafiaypldlfeegsvtniltsivgnvfgfk
airslrledirfpvalvktfqgpphgiqverdllnkygrpmlgctikpklglsaknygra
vyeclrggldftkddeninsqpfqrwrdrflfvadaihksqaetgeikghylnvtaptce
emmkraefakelgmpiimhdfltagftanttlakwcrdngvllhihramhavidrqrnhg
ihfrvlakclrlsggdhlhsgtvvgklegdkastlgfvdlmredhieadrsrgvfftqdw
asmpgvlpvasggihvwhmpalveifgddsvlqfgggtlghpwgnapgatanrvaleacv
qarnegrdlyreggdilreagkwspelaaaldlwkeikfefetmdkl

Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)

>1rblC (C:)
saagykagvkdykltyytpdytpkdtdllaafrfspqpgvpadeagaaiaaesstgtwtt
vwtdlltdmdrykgkcyhiepvageensyfafiaypldlfeegsvtniltsivgnvfgfk
airslrledirfpvalvktfqgpphgiqverdllnkygrpmlgctikpklglsaknygra
vyeclrggldftkddeninsqpfqrwrdrflfvadaihksqaetgeikghylnvtaptce
emmkraefakelgmpiimhdfltagftanttlakwcrdngvllhihramhavidrqrnhg
ihfrvlakclrlsggdhlhsgtvvgklegdkastlgfvdlmredhieadrsrgvfftqdw
asmpgvlpvasggihvwhmpalveifgddsvlqfgggtlghpwgnapgatanrvaleacv
qarnegrdlyreggdilreagkwspelaaaldlwkeikfefetmdkl

Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)

>1rblD (D:)
saagykagvkdykltyytpdytpkdtdllaafrfspqpgvpadeagaaiaaesstgtwtt
vwtdlltdmdrykgkcyhiepvageensyfafiaypldlfeegsvtniltsivgnvfgfk
airslrledirfpvalvktfqgpphgiqverdllnkygrpmlgctikpklglsaknygra
vyeclrggldftkddeninsqpfqrwrdrflfvadaihksqaetgeikghylnvtaptce
emmkraefakelgmpiimhdfltagftanttlakwcrdngvllhihramhavidrqrnhg
ihfrvlakclrlsggdhlhsgtvvgklegdkastlgfvdlmredhieadrsrgvfftqdw
asmpgvlpvasggihvwhmpalveifgddsvlqfgggtlghpwgnapgatanrvaleacv
qarnegrdlyreggdilreagkwspelaaaldlwkeikfefetmdkl

Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)

>1rblE (E:)
saagykagvkdykltyytpdytpkdtdllaafrfspqpgvpadeagaaiaaesstgtwtt
vwtdlltdmdrykgkcyhiepvageensyfafiaypldlfeegsvtniltsivgnvfgfk
airslrledirfpvalvktfqgpphgiqverdllnkygrpmlgctikpklglsaknygra
vyeclrggldftkddeninsqpfqrwrdrflfvadaihksqaetgeikghylnvtaptce
emmkraefakelgmpiimhdfltagftanttlakwcrdngvllhihramhavidrqrnhg
ihfrvlakclrlsggdhlhsgtvvgklegdkastlgfvdlmredhieadrsrgvfftqdw
asmpgvlpvasggihvwhmpalveifgddsvlqfgggtlghpwgnapgatanrvaleacv
qarnegrdlyreggdilreagkwspelaaaldlwkeikfefetmdkl

Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)

>1rblF (F:)
saagykagvkdykltyytpdytpkdtdllaafrfspqpgvpadeagaaiaaesstgtwtt
vwtdlltdmdrykgkcyhiepvageensyfafiaypldlfeegsvtniltsivgnvfgfk
airslrledirfpvalvktfqgpphgiqverdllnkygrpmlgctikpklglsaknygra
vyeclrggldftkddeninsqpfqrwrdrflfvadaihksqaetgeikghylnvtaptce
emmkraefakelgmpiimhdfltagftanttlakwcrdngvllhihramhavidrqrnhg
ihfrvlakclrlsggdhlhsgtvvgklegdkastlgfvdlmredhieadrsrgvfftqdw
asmpgvlpvasggihvwhmpalveifgddsvlqfgggtlghpwgnapgatanrvaleacv
qarnegrdlyreggdilreagkwspelaaaldlwkeikfefetmdkl

Chain 'G':
Sequence; same for both SEQRES and ATOM records: (download)

>1rblG (G:)
saagykagvkdykltyytpdytpkdtdllaafrfspqpgvpadeagaaiaaesstgtwtt
vwtdlltdmdrykgkcyhiepvageensyfafiaypldlfeegsvtniltsivgnvfgfk
airslrledirfpvalvktfqgpphgiqverdllnkygrpmlgctikpklglsaknygra
vyeclrggldftkddeninsqpfqrwrdrflfvadaihksqaetgeikghylnvtaptce
emmkraefakelgmpiimhdfltagftanttlakwcrdngvllhihramhavidrqrnhg
ihfrvlakclrlsggdhlhsgtvvgklegdkastlgfvdlmredhieadrsrgvfftqdw
asmpgvlpvasggihvwhmpalveifgddsvlqfgggtlghpwgnapgatanrvaleacv
qarnegrdlyreggdilreagkwspelaaaldlwkeikfefetmdkl

Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)

>1rblH (H:)
saagykagvkdykltyytpdytpkdtdllaafrfspqpgvpadeagaaiaaesstgtwtt
vwtdlltdmdrykgkcyhiepvageensyfafiaypldlfeegsvtniltsivgnvfgfk
airslrledirfpvalvktfqgpphgiqverdllnkygrpmlgctikpklglsaknygra
vyeclrggldftkddeninsqpfqrwrdrflfvadaihksqaetgeikghylnvtaptce
emmkraefakelgmpiimhdfltagftanttlakwcrdngvllhihramhavidrqrnhg
ihfrvlakclrlsggdhlhsgtvvgklegdkastlgfvdlmredhieadrsrgvfftqdw
asmpgvlpvasggihvwhmpalveifgddsvlqfgggtlghpwgnapgatanrvaleacv
qarnegrdlyreggdilreagkwspelaaaldlwkeikfefetmdkl

Chain 'I':
Sequence; same for both SEQRES and ATOM records: (download)

>1rblI (I:)
smktlpkerrfetfsylpplsdrqiaaqieymieqgfhpliefnehsnpeefywtmwklp
lfacaapqqvldevrecrseygdcyirvagfdnikecqtssfivhrpgr

Chain 'J':
Sequence; same for both SEQRES and ATOM records: (download)

>1rblJ (J:)
smktlpkerrfetfsylpplsdrqiaaqieymieqgfhpliefnehsnpeefywtmwklp
lfacaapqqvldevrecrseygdcyirvagfdnikecqtssfivhrpgr

Chain 'K':
Sequence; same for both SEQRES and ATOM records: (download)

>1rblK (K:)
smktlpkerrfetfsylpplsdrqiaaqieymieqgfhpliefnehsnpeefywtmwklp
lfacaapqqvldevrecrseygdcyirvagfdnikecqtssfivhrpgr

Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)

>1rblL (L:)
smktlpkerrfetfsylpplsdrqiaaqieymieqgfhpliefnehsnpeefywtmwklp
lfacaapqqvldevrecrseygdcyirvagfdnikecqtssfivhrpgr

Chain 'M':
Sequence; same for both SEQRES and ATOM records: (download)

>1rblM (M:)
smktlpkerrfetfsylpplsdrqiaaqieymieqgfhpliefnehsnpeefywtmwklp
lfacaapqqvldevrecrseygdcyirvagfdnikecqtssfivhrpgr

Chain 'N':
Sequence; same for both SEQRES and ATOM records: (download)

>1rblN (N:)
smktlpkerrfetfsylpplsdrqiaaqieymieqgfhpliefnehsnpeefywtmwklp
lfacaapqqvldevrecrseygdcyirvagfdnikecqtssfivhrpgr

Chain 'O':
Sequence; same for both SEQRES and ATOM records: (download)

>1rblO (O:)
smktlpkerrfetfsylpplsdrqiaaqieymieqgfhpliefnehsnpeefywtmwklp
lfacaapqqvldevrecrseygdcyirvagfdnikecqtssfivhrpgr

Chain 'P':
Sequence; same for both SEQRES and ATOM records: (download)

>1rblP (P:)
smktlpkerrfetfsylpplsdrqiaaqieymieqgfhpliefnehsnpeefywtmwklp
lfacaapqqvldevrecrseygdcyirvagfdnikecqtssfivhrpgr