PDB entry 1r4q

View 1r4q on RCSB PDB site
Description: Shiga toxin
Class: toxin
Keywords: AB5 toxin, TOXIN
Deposited on 2003-10-07, released 2004-05-11
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-11, with a file datestamp of 2017-10-06.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SHT cytotoxin A subunit
    Species: Shigella dysenteriae [TaxId:622]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7BQ99 (0-End)
      • see remark 999 (167)
    Domains in SCOPe 2.07: d1r4qa_
  • Chain 'B':
    Compound: Shigella toxin chain B
    Species: Shigella dysenteriae [TaxId:622]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1r4qb_
  • Chain 'C':
    Compound: Shigella toxin chain B
    Species: Shigella dysenteriae [TaxId:622]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1r4qc_
  • Chain 'D':
    Compound: Shigella toxin chain B
    Species: Shigella dysenteriae [TaxId:622]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1r4qd_
  • Chain 'E':
    Compound: Shigella toxin chain B
    Species: Shigella dysenteriae [TaxId:622]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1r4qe_
  • Chain 'F':
    Compound: Shigella toxin chain B
    Species: Shigella dysenteriae [TaxId:622]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1r4qf_
  • Chain 'G':
    Compound: Shigella toxin chain B
    Species: Shigella dysenteriae [TaxId:622]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1r4qg_
  • Chain 'H':
    Compound: Shigella toxin chain B
    Species: Shigella dysenteriae [TaxId:622]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1r4qh_
  • Chain 'I':
    Compound: Shigella toxin chain B
    Species: Shigella dysenteriae [TaxId:622]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1r4qi_
  • Chain 'J':
    Compound: Shigella toxin chain B
    Species: Shigella dysenteriae [TaxId:622]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1r4qj_
  • Chain 'K':
    Compound: Shigella toxin chain B
    Species: Shigella dysenteriae [TaxId:622]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1r4qk_
  • Chain 'L':
    Compound: SHT cytotoxin A subunit
    Species: Shigella dysenteriae [TaxId:622]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7BQ99 (0-End)
      • see remark 999 (167)
    Domains in SCOPe 2.07: d1r4ql_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1r4qA (A:)
keftldfstaktyvdslnvirsaigtplqtissggtsllmidsgtgdnlfavdvrgidpe
egrfnnlrlivernnlyvtgfvnrtnnvfyrfadfshvtfpgttavtlsgdssyttlqrv
agisrtgmqinrhslttsyldlmshsgtsltqsvaramlrfvtvtaealrfrqiqrgfrt
tlddlsgrsyvmtaedvdltlnwgrlssvlpdyhgqdsvrvgrisfgsinailgsvalil
nchhhasrvarmasdefpsmcpadgrvrgithnkilwdsstlgailmrrtiss

    Sequence, based on observed residues (ATOM records): (download) 
    >1r4qA (A:)
keftldfstaktyvdslnvirsaigtplqtissggtsllmidsgtgdnlfavdvrgidpe
egrfnnlrlivernnlyvtgfvnrtnnvfyrfadfshvtfpgttavtlsgdssyttlqrv
agisrtgmqinrhslttsyldlmshsgtsltqsvaramlrfvtvtaealrfrqiqrgfrt
tlddlsgrsyvmtaedvdltlnwgrlssvlpdyhgqdsvrvgrisfgsinailgsvalil
nchfpsmcpadgrvrgithnkilwdsstlgailmrr

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1r4qB (B:)
tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
ggfsevifr

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1r4qC (C:)
tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
ggfsevifr

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1r4qD (D:)
tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
ggfsevifr

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1r4qE (E:)
tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
ggfsevifr

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1r4qF (F:)
tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
ggfsevifr

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1r4qG (G:)
tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
ggfsevifr

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1r4qH (H:)
tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
ggfsevifr

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1r4qI (I:)
tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
ggfsevifr

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1r4qJ (J:)
tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
ggfsevifr

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1r4qK (K:)
tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
ggfsevifr

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >1r4qL (L:)
keftldfstaktyvdslnvirsaigtplqtissggtsllmidsgtgdnlfavdvrgidpe
egrfnnlrlivernnlyvtgfvnrtnnvfyrfadfshvtfpgttavtlsgdssyttlqrv
agisrtgmqinrhslttsyldlmshsgtsltqsvaramlrfvtvtaealrfrqiqrgfrt
tlddlsgrsyvmtaedvdltlnwgrlssvlpdyhgqdsvrvgrisfgsinailgsvalil
nchhhasrvarmasdefpsmcpadgrvrgithnkilwdsstlgailmrrtiss

    Sequence, based on observed residues (ATOM records): (download) 
    >1r4qL (L:)
keftldfstaktyvdslnvirsaigtplqtissggtsllmidsgtgdnlfavdvrgidpe
egrfnnlrlivernnlyvtgfvnrtnnvfyrfadfshvtfpgttavtlsgdssyttlqrv
agisrtgmqinrhslttsyldlmshsgtsltqsvaramlrfvtvtaealrfrqiqrgfrt
tlddlsgrsyvmtaedvdltlnwgrlssvlpdyhgqdsvrvgrisfgsinailgsvalil
nchfpsmcpadgrvrgithnkilwdsstlgailmrrt