PDB entry 1qsf
View 1qsf on RCSB PDB site
Description: structure of a6-tcr bound to hla-a2 complexed with altered htlv-1 tax peptide y8a
Class: immune system
Keywords: human t cell receptor, tcr/peptide/MHC complex, hla-a2, immune system
Deposited on
1999-06-21, released
1999-12-21
The last revision prior to the SCOPe 2.02 freeze date was dated
2009-08-25, with a file datestamp of
2009-08-21.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.245
AEROSPACI score: 0.2
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: MHC class I hla-a
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1qsfa1, d1qsfa2 - Chain 'B':
Compound: beta-2 microglobulin
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1qsfb_ - Chain 'C':
Compound: tax peptide y8a
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: hman T-cell receptor
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1qsfd1, d1qsfd2 - Chain 'E':
Compound: hman T-cell receptor
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1qsfe1, d1qsfe2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1qsfA (A:)
gshsmryfftsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
dgetrkvkahsqthrvdlgtlrgyynqseagshtvqrmygcdvgsdwrflrgyhqyaydg
kdyialkedlrswtaadmaaqttkhkweaahvaeqlraylegtcvewlrrylengketlq
rtdapkthmthhavsdheatlrcwalsfypaeitltwqadgedqtqdtelvetrpagdgt
fqkwaavvvpsgqeqrytchvqheglpkpltlrw
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1qsfB (B:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
- Chain 'C':
No sequence available.
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1qsfD (D:)
keveqnsgplsvpegaiaslnctysdrgsqsffwyrqysgkspelimsiysngdkedgrf
taqlnkasqyvsllirdsqpsdsatylcavttdswgklqfgagtqvvvtpdiqnpdpavy
qlrdskssdksvclftdfdsqtnvsqskdsdvyitdktvldmrsmdfksnsavawsnksd
facanafnnsiipedtffps
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>1qsfE (E:)
gvtqtpkfqvlktgqsmtlqcaqdmnheymswyrqdpgmglrlihysvgagitdqgevpn
gynvsrsttedfplrllsaapsqtsvyfcasrpglaggrpeqyfgpgtrltvtedlknvf
ppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvstdpqplkeqp
alndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewaqdrakpvtqivsaeawg
rad