PDB entry 1qqp
View 1qqp on RCSB PDB site
Description: foot-and-mouth disease virus/ oligosaccharide receptor complex.
Class: Virus
Keywords: VIRUS, HEPARAN SULPHATE, VIRUS-RECEPTOR INTERACTIONS/PROTEIN-CARBOHYDRATE INTERACTIONS, VIRUS/VIRAL PROTEIN, Icosahedral virus
Deposited on
1999-05-20, released
1999-06-18
The last revision prior to the SCOPe 2.07 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-25.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.161
AEROSPACI score: 0.48
(click here for full SPACI score report)
Chains and heterogens:
- Chain '1':
Compound: protein (genome polyprotein)
Species: Foot-and-mouth disease virus [TaxId:12110]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1qqp1_ - Chain '2':
Compound: protein (genome polyprotein)
Species: Foot-and-mouth disease virus [TaxId:12110]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1qqp.1 - Chain '3':
Compound: protein (genome polyprotein)
Species: Foot-and-mouth disease virus [TaxId:12110]
Database cross-references and differences (RAF-indexed):
- Uniprot P03305 (0-219)
- see remark 999 (84)
- see remark 999 (167)
- see remark 999 (172)
Domains in SCOPe 2.07: d1qqp3_ - Chain '4':
Compound: protein (genome polyprotein)
Species: Foot-and-mouth disease virus [TaxId:12110]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1qqp.1 - Heterogens: HOH
PDB Chain Sequences:
- Chain '1':
Sequence, based on SEQRES records: (download)
>1qqp1 (1:)
ttsagesadpvtttvenyggetqiqrrqhtdvsfimdrfvkvtpqnqinildlmqvpsht
lvgallrastyyfsdleiavkhegdltwvpngapekaldnttnptayhkapltrlalpyt
aphrvlatvyngecrysrnavpnlrgdlqvlaqkvartlptsfnygaikatrvtellyrm
kraetycprpllaihptearhkqkivapvkqtl
Sequence, based on observed residues (ATOM records): (download)
>1qqp1 (1:)
ttsagesadpvtttvenyggetqiqrrqhtdvsfimdrfvkvtpqnqinildlmqvpsht
lvgallrastyyfsdleiavkhegdltwvpngapekaldnttnptayhkapltrlalpyt
aphrvlatvyngecrtlptsfnygaikatrvtellyrmkraetycprpllaihptearhk
qkivapvk
- Chain '2':
Sequence, based on SEQRES records: (download)
>1qqp2 (2:)
dkkteettlledrilttrnghttsttqssvgvtygyataedfvsgpntsgletrvvqaer
ffkthlfdwvtsdsfgrchllelptdhkgvygsltdsyaymrngwdvevtavgnqfnggc
llvamvpelcsiqkrelyqltlfphqfinprtnmtahitvpfvgvnrydqykvhkpwtlv
vmvvapltvntegapqikvyaniaptnvhvagefpske
Sequence, based on observed residues (ATOM records): (download)
>1qqp2 (2:)
dkktttlledrilttrnghttsttqssvgvtygyataedfvsgpntsgletrvvqaerff
kthlfdwvtsdsfgrchllelptdhkgvygsltdsyaymrngwdvevtavgnqfnggcll
vamvpelcsiqkrelyqltlfphqfinprtnmtahitvpfvgvnrydqykvhkpwtlvvm
vvapltvntegapqikvyaniaptnvhvagefpske
- Chain '3':
Sequence; same for both SEQRES and ATOM records: (download)
>1qqp3 (3:)
gifpvacsdgygglvttdpktadpvygkvfnpprnqlpgrftnlldvaeacptflrfegg
vpyvttktdsdrvlaqfdmslaakhmsntflaglaqyytqysgtinlhfmftgptdakar
ymvayappgmeppktpeaaahcihaewdtglnskftfsipylsaadytytasdvaettnv
qgwvclfqithgkadgdalvvlasagkdfelrlpvdarae
- Chain '4':
Sequence, based on SEQRES records: (download)
>1qqp4 (4:)
gagqsspatgsqnqsgntgsiinnyymqqyqnsmdtqlgndaisggsnegstdttsthtt
ntqnndwfsklassafsglfgalla
Sequence, based on observed residues (ATOM records): (download)
>1qqp4 (4:)
sgntgsiinnyymqqyqnsmdtqlgndwfsklassafsglfgalla