PDB entry 1qqc

View 1qqc on RCSB PDB site
Description: crystal structure of an archaebacterial DNA polymerase d.tok
Class: transferase
Keywords: DNA polymerase, thermostable, exonuclease, rbd domain, transferase
Deposited on 1999-06-02, released 1999-10-14
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.244
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase II
    Species: Desulfurococcus sp. Tok [TaxId:108142]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1qqca1, d1qqca2
  • Heterogens: SO4, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1qqcA (A:)
mildadyitedgkpvirvfkkekgefkidydrdfepyiyallkddsaiedikkitaerhg
ttvrvtraervkkkflgrpvevwklyfthpqdvpairdkirehpavvdiyeydipfakry
lidrglipmegdeelrmlafdietlyhegeefgegpilmisyadeegarvitwknidlpy
vesvstekemikrflkviqekdpdvlityngdnfdfaylkkrsemlgvkfilgrdgsepk
iqrmgdrfavevkgrihfdlypvirrtinlptytletvyepvfgqpkekvyaeeiarawe
sgeglervarysmedakatyelgkeffpmeaqlsrlvgqslwdvsrsstgnlvewfllrk
ayerndvapnkpderelarrtesyaggyvkepekglwenivyldykslypsiiithnvsp
dtlnregcreydvapqvghrfckdfpgfipsllgdlleerqkvkkkmkatvdpierklld
yrqraikilansyygyyayanarwycrecaesvtawgrqyiettmreieekfgfkvlyad
tdgffatipgadaetvknkakeflnyinprlpglleleyegfyrrgffvtkkkyavidee
dkittrgleivrrdwseiaketqarvleailkhgdveeavrivkevteklsrhevppekl
viyeqitrdlrsyratgphvavakrlaargikirpgtvisyivlkgpgrvgdraipfdef
dpakhrydaeyyienqvlpaverilrafgyrkedlryqktkqaglgawlkpkt

    Sequence, based on observed residues (ATOM records): (download) 
    >1qqcA (A:)
mildadyitedgkpvirvfkkekgefkidydrdfepyiyallkddsaiedikkitaerhg
ttvrvtraervkkkflgrpvevwklyfthpqdvpairdkirehpavvdiyeydipfakry
lidrglipmegdeelrmlafdietlyhegeefgegpilmisyadeegarvitwknidlpy
vesvstekemikrflkviqekdpdvlityngdnfdfaylkkrsemlgvkfilgrdgsepk
iqrmgdrfavevkgrihfdlypvirrtinlptytletvyepvfgqpkekvyaeeiarawe
sgeglervarysmedakatyelgkeffpmeaqlsrlvgqslwdvsrsstgnlvewfllrk
ayerndvapnkpderelarrtesyakepekglwenivyldykslypsiiithnvspdtln
regcreydvapqvghrfckdfpgfipsllgdlleerqkvkkkmkatvdpierklldyrqr
aikilansyygyyayanarwycrecaesvtawgrqyiettmreieekfgfkvlyadtdgf
fatipgadaetvknkakeflnyinprlpglleleyegfyrrgffvtkkkyavideedkit
trgleivrrdwseiaketqarvleailkhgdveeavrivkevteklsrhevppeklviye
gphvavakrlaargikirpgtvisyivlkgpgrvgdraipfdefdpakhrydaeyyienq
vlpaverilrafgyrkedlr