SCOP 1.75: Structural Classification of Proteins

PDB entry 1qoo

View 1qoo on RCSB PDB site
Description: lectin uea-II complexed with nag
Class: lectin
Keywords: lectin, carbohydrate binding, n-acetylglucosamine
Deposited on 1999-11-15, released 1999-11-23
The last revision prior to the SCOP 1.75 freeze date was dated 2003-04-01, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.75 Å
R-factor: 0.174
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: chitin binding lectin, uea-II
Species: Ulex europeus
Database cross-references and differences (RAF-indexed):
- Uniprot Q9FVF8
  - onflict (24)
  - onflict (61)
  - onflict (105)
  - onflict (111)
  - onflict (190)
  - onflict (228)
Domains in SCOP 1.75: d1qooa_
Chain 'B':
Compound: chitin binding lectin, uea-II
Species: Ulex europeus
Database cross-references and differences (RAF-indexed):
- Uniprot Q9FVF8
  - onflict (24)
  - onflict (61)
  - onflict (105)
  - onflict (111)
  - onflict (190)
  - onflict (228)
Domains in SCOP 1.75: d1qoob_
Chain 'C':
Compound: chitin binding lectin, uea-II
Species: Ulex europeus
Database cross-references and differences (RAF-indexed):
- Uniprot Q9FVF8
  - onflict (24)
  - onflict (61)
  - onflict (105)
  - onflict (111)
  - onflict (190)
  - onflict (228)
Domains in SCOP 1.75: d1qooc_
Chain 'D':
Compound: chitin binding lectin, uea-II
Species: Ulex europeus
Database cross-references and differences (RAF-indexed):
- Uniprot Q9FVF8
  - onflict (24)
  - onflict (61)
  - onflict (105)
  - onflict (111)
  - onflict (190)
  - onflict (228)
Domains in SCOP 1.75: d1qood_
Heterogens: NAG, MN, CA

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1qooA (A:)
nlsddlsfnfdkfvpnqkniifqgdasvsttgvlqvtkvskptttsigralyaapiqiwd
sitgkvasfatsfsfvvkadksdgvdglafflapansqipsgssagmfglfsssdskssn
qiiavefdtyfgkaynpwdpdfkhigidvnsiksiktvkwdwrngevadvvityraptks
ltvclsypsdgtsniitasvdlkailpewvsvgfsggvgnaaefethdvlswyftsnlea
nn

Sequence, based on observed residues (ATOM records): (download)

>1qooA (A:)
sddlsfnfdkfvpnqkniifqgdasvsttgvlqvtkvstttsigralyaapiqiwdsitg
kvasfatsfsfvvkadksdgvdglafflapansqipsgssagmfglfsssdskssnqiia
vefdtyfgkaynpwdpdfkhigidvnsiksiktvkwdwrngevadvvityraptksltvc
lsypsdgtsniitasvdlkailpewvsvgfsggvgnaaefethdvlswyftsnle

Chain 'B':
Sequence, based on SEQRES records: (download)

>1qooB (B:)
nlsddlsfnfdkfvpnqkniifqgdasvsttgvlqvtkvskptttsigralyaapiqiwd
sitgkvasfatsfsfvvkadksdgvdglafflapansqipsgssagmfglfsssdskssn
qiiavefdtyfgkaynpwdpdfkhigidvnsiksiktvkwdwrngevadvvityraptks
ltvclsypsdgtsniitasvdlkailpewvsvgfsggvgnaaefethdvlswyftsnlea
nn

Sequence, based on observed residues (ATOM records): (download)

>1qooB (B:)
sddlsfnfdkfvpnqkniifqgdasvsttgvlqvtkvskptttsigralyaapiqiwdsi
tgkvasfatsfsfvvkadksdgvdglafflapansqipsgssagmfglfsssdskssnqi
iavefdtyfgkaynpwdpdfkhigidvnsiksiktvkwdwrngevadvvityraptkslt
vclsypsdgtsniitasvdlkailpewvsvgfsggvgnaaefethdvlswyftsnle

Chain 'C':
Sequence, based on SEQRES records: (download)

>1qooC (C:)
nlsddlsfnfdkfvpnqkniifqgdasvsttgvlqvtkvskptttsigralyaapiqiwd
sitgkvasfatsfsfvvkadksdgvdglafflapansqipsgssagmfglfsssdskssn
qiiavefdtyfgkaynpwdpdfkhigidvnsiksiktvkwdwrngevadvvityraptks
ltvclsypsdgtsniitasvdlkailpewvsvgfsggvgnaaefethdvlswyftsnlea
nn

Sequence, based on observed residues (ATOM records): (download)

>1qooC (C:)
sddlsfnfdkfvpnqkniifqgdasvsttgvlqvtkvskptttsigralyaapiqiwdsi
tgkvasfatsfsfvvkadksdgvdglafflapansqipsgssagmfglfsssdskssnqi
iavefdtyfgkaynpwdpdfkhigidvnsiksiktvkwdwrngevadvvityraptkslt
vclsypsdgtsniitasvdlkailpewvsvgfsggvgnaaefethdvlswyftsnle

Chain 'D':
Sequence, based on SEQRES records: (download)

>1qooD (D:)
nlsddlsfnfdkfvpnqkniifqgdasvsttgvlqvtkvskptttsigralyaapiqiwd
sitgkvasfatsfsfvvkadksdgvdglafflapansqipsgssagmfglfsssdskssn
qiiavefdtyfgkaynpwdpdfkhigidvnsiksiktvkwdwrngevadvvityraptks
ltvclsypsdgtsniitasvdlkailpewvsvgfsggvgnaaefethdvlswyftsnlea
nn

Sequence, based on observed residues (ATOM records): (download)

>1qooD (D:)
sddlsfnfdkfvpnqkniifqgdasvsttgvlqvtkvskptttsigralyaapiqiwdsi
tgkvasfatsfsfvvkadksdgvdglafflapansqipsgssagmfglfsssdskssnqi
iavefdtyfgkaynpwdpdfkhigidvnsiksiktvkwdwrngevadvvityraptkslt
vclsypsdgtsniitasvdlkailpewvsvgfsggvgnaaefethdvlswyftsnle