PDB entry 1qnz

View 1qnz on RCSB PDB site
Description: nmr structure of the 0.5b anti-hiv antibody complex with the gp120 v3 peptide
Class: antibody
Keywords: antibody, v3 peptide, binding site
Deposited on 1999-10-26, released 2000-06-03
The last revision prior to the SCOP 1.75 freeze date was dated 2000-06-03, with a file datestamp of 2007-06-04.
Experiment type: NMR
Resolution: N/A
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: 0.5b antibody (heavy chain)
    Species: MUS MUSCULUS
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01750 (0-118)
      • conflict (24)
    Domains in SCOP 1.75: d1qnzh_
  • Chain 'L':
    Compound: 0.5b antibody (light chain)
    Species: MUS MUSCULUS
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01665 (0-110)
      • conflict (71)
    Domains in SCOP 1.75: d1qnzl_
  • Chain 'P':
    Compound: gp120
    Species: Human immunodeficiency virus 1
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1qnzH (H:)
    qvqlqqsgaelvkpgasvkmsckasgytfttypiewmkqnhgkslewignfhpysddtny
    nekfkgkakltvekssstvylefsrltsddsavyycaihygsayamdywgqgtsvtvss
    

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1qnzL (L:)
    divltqspaslavslgqratisckasqsvdydgdsymnwyqqkpgqppklliyaasnles
    giparfsgsgsrtdftlnihpveeedaatyycqqsnedpftfgsgtkleikr
    

  • Chain 'P':
    No sequence available.