PDB entry 1qbz

View 1qbz on RCSB PDB site
Description: the crystal structure of the siv gp41 ectodomain at 1.47 a
Deposited on 1999-04-28, released 1999-05-17
The last revision was dated 2015-12-16, with a file datestamp of 2015-12-11.
Experiment type: XRAY
Resolution: 1.47 Å
R-factor: 0.16
AEROSPACI score: 0.69 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (siv gp41 ectodomain)
    Species: Simian immunodeficiency virus [TaxId:11723]
    Database cross-references and differences (RAF-indexed):
    • GB G431600
  • Chain 'B':
    Compound: protein (siv gp41 ectodomain)
    Species: Simian immunodeficiency virus [TaxId:11723]
    Database cross-references and differences (RAF-indexed):
    • GB G431600 (Start-122)
  • Chain 'C':
    Compound: protein (siv gp41 ectodomain)
    Species: Simian immunodeficiency virus [TaxId:11723]
    Database cross-references and differences (RAF-indexed):
    • GB G431600 (Start-122)
      • engineered mutation (59)
  • Heterogens: HG, CL, MRD, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOP 1.55, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >1qbzA (A:)
aqsrtllagivqqqqqlldvvkrqqellrltvwgtknlqtrvtaiekylkdqaqlnawga
afrqvahttvpwpnasltpkwnnetwqewerkvdfleenitalleeaqiqqeknmyelqk
lns

    Sequence, based on observed residues (ATOM records):
    >1qbzA (A:)
qsrtllagivqqqqqlldvvkrqqellrltvwgtknlqtrvtaiekylkdqaqlnawgtp
kwnnetwqewerkvdfleenitalleeaqiqqeknmyelqkl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >1qbzB (B:)
aqsrtllagivqqqqqlldvvkrqqellrltvwgtknlqtrvtaiekylkdqaqlnawga
afrqvahttvpwpnasltpkwnnetwqewerkvdfleenitalleeaqiqqeknmyelqk
lns

    Sequence, based on observed residues (ATOM records):
    >1qbzB (B:)
qsrtllagivqqqqqlldvvkrqqellrltvwgtknlqtrvtaiekylkdqaqlnawgtt
vpwpnasltpkwnnetwqewerkvdfleenitalleeaqiqqeknmyelqklns

  • Chain 'C':
    Sequence, based on SEQRES records:
    >1qbzC (C:)
aqsrtllagivqqqqqlldvvkrqqellrltvwgtknlqtrvtaiekylkdqaqlnawga
afrqvahttvpwpnasltpkwnnetwqewerkvdfleenitalleeaqiqqeknmyelqk
lns

    Sequence, based on observed residues (ATOM records):
    >1qbzC (C:)
qsrtllagivqqqqqlldvvkrqqellrltvwgtknlqtrvtaiekylkdqaqlnawgaa
frqvttvpwpnasltpkwnnetwqewerkvdfleenitalleeaqiqqeknmyelqklns