PDB entry 1qbj

View 1qbj on RCSB PDB site
Description: crystal structure of the zalpha z-DNA complex
Class: hydrolase/DNA
Keywords: protein-z-DNA complex, hydrolase-DNA complex
Deposited on 1999-04-22, released 1999-07-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-11-16, with a file datestamp of 2011-11-11.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.227
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (double-stranded RNA specific adenosine deaminase (adar1))
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1qbja_
  • Chain 'B':
    Compound: protein (double-stranded RNA specific adenosine deaminase (adar1))
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1qbjb_
  • Chain 'C':
    Compound: protein (double-stranded RNA specific adenosine deaminase (adar1))
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1qbjc_
  • Chain 'D':
    Compound: DNA (5'-d(*tp*cp*gp*cp*gp*cp*g)-3')
    Species: synthetic, synthetic
  • Chain 'E':
    Compound: DNA (5'-d(*tp*cp*gp*cp*gp*cp*g)-3')
    Species: synthetic, synthetic
  • Chain 'F':
    Compound: DNA (5'-d(*tp*cp*gp*cp*gp*cp*g)-3')
    Species: synthetic, synthetic
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1qbjA (A:)
    gshmlsiyqdqeqrilkfleelgegkattahdlsgklgtpkkeinrvlyslakkgklqke
    agtpplwkiavstqawnqhsg
    

    Sequence, based on observed residues (ATOM records): (download)
    >1qbjA (A:)
    siyqdqeqrilkfleelgegkattahdlsgklgtpkkeinrvlyslakkgklqkeagtpp
    lwkia
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1qbjB (B:)
    gshmlsiyqdqeqrilkfleelgegkattahdlsgklgtpkkeinrvlyslakkgklqke
    agtpplwkiavstqawnqhsg
    

    Sequence, based on observed residues (ATOM records): (download)
    >1qbjB (B:)
    yqdqeqrilkfleelgegkattahdlsgklgtpkkeinrvlyslakkgklqkeagtpplw
    kia
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1qbjC (C:)
    gshmlsiyqdqeqrilkfleelgegkattahdlsgklgtpkkeinrvlyslakkgklqke
    agtpplwkiavstqawnqhsg
    

    Sequence, based on observed residues (ATOM records): (download)
    >1qbjC (C:)
    siyqdqeqrilkfleelgegkattahdlsgklgtpkkeinrvlyslakkgklqkeagtpp
    lwkiav
    

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.