PDB entry 1qaj
View 1qaj on RCSB PDB site
Description: crystal structures of the n-terminal fragment from moloney murine leukemia virus reverse transcriptase complexed with nucleic acid: functional implications for template-primer binding to the fingers domain
Class: transferase/DNA
Keywords: protein-DNA complex, polymerase, reverse transcriptase, moloney murine
leukemia virus
Deposited on
1999-03-18, released
2000-04-02
The last revision prior to the SCOP 1.75 freeze date was dated
2003-04-01, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.2
AEROSPACI score: 0.44
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: reverse transcriptase
Species: Moloney murine leukemia virus
Gene: MMLV-RT
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1qaja_ - Chain 'B':
Compound: reverse transcriptase
Species: Moloney murine leukemia virus
Gene: MMLV-RT
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1qajb_ - Chain 'C':
Compound: DNA (5'-d(*cp*ap*tp*gp*cp*ap*tp*g)-3')
- Chain 'D':
Compound: DNA (5'-d(*cp*ap*tp*gp*cp*ap*tp*g)-3')
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1qajA (A:)
gshmtwlsdfpqawaetggmglavrqapliiplkatstpvsikqypmsqearlgikphiq
rlldqgilvpcqspwntpllpvkkpgtndyrpvqdlrevnkrvedihptvpnpynllsgl
ppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlf
dealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakka
qicqkqvkylgyllkegqr
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1qajB (B:)
gshmtwlsdfpqawaetggmglavrqapliiplkatstpvsikqypmsqearlgikphiq
rlldqgilvpcqspwntpllpvkkpgtndyrpvqdlrevnkrvedihptvpnpynllsgl
ppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlf
dealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakka
qicqkqvkylgyllkegqr
Sequence, based on observed residues (ATOM records): (download)
>1qajB (B:)
hmtwlsdfpqawaetggmglavrqapliiplkatstpvsikqypmsqearlgikphiqrl
ldqgilvpcqspwntpllpvkkpgtndyrpvqdlrevnkrvedihptvpnpynllsglpp
shqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfde
alhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqi
cqkqvkylgyllkegqr
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.