PDB entry 1qaj

View 1qaj on RCSB PDB site
Description: crystal structures of the n-terminal fragment from moloney murine leukemia virus reverse transcriptase complexed with nucleic acid: functional implications for template-primer binding to the fingers domain
Class: transferase/DNA
Keywords: protein-DNA complex, polymerase, reverse transcriptase, moloney murine leukemia virus
Deposited on 1999-03-18, released 2000-04-02
The last revision prior to the SCOP 1.75 freeze date was dated 2003-04-01, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.2
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: reverse transcriptase
    Species: Moloney murine leukemia virus
    Gene: MMLV-RT
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1qaja_
  • Chain 'B':
    Compound: reverse transcriptase
    Species: Moloney murine leukemia virus
    Gene: MMLV-RT
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1qajb_
  • Chain 'C':
    Compound: DNA (5'-d(*cp*ap*tp*gp*cp*ap*tp*g)-3')
  • Chain 'D':
    Compound: DNA (5'-d(*cp*ap*tp*gp*cp*ap*tp*g)-3')
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1qajA (A:)
    gshmtwlsdfpqawaetggmglavrqapliiplkatstpvsikqypmsqearlgikphiq
    rlldqgilvpcqspwntpllpvkkpgtndyrpvqdlrevnkrvedihptvpnpynllsgl
    ppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlf
    dealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakka
    qicqkqvkylgyllkegqr
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1qajB (B:)
    gshmtwlsdfpqawaetggmglavrqapliiplkatstpvsikqypmsqearlgikphiq
    rlldqgilvpcqspwntpllpvkkpgtndyrpvqdlrevnkrvedihptvpnpynllsgl
    ppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlf
    dealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakka
    qicqkqvkylgyllkegqr
    

    Sequence, based on observed residues (ATOM records): (download)
    >1qajB (B:)
    hmtwlsdfpqawaetggmglavrqapliiplkatstpvsikqypmsqearlgikphiqrl
    ldqgilvpcqspwntpllpvkkpgtndyrpvqdlrevnkrvedihptvpnpynllsglpp
    shqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfde
    alhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqi
    cqkqvkylgyllkegqr
    

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.