PDB entry 1qai

View 1qai on RCSB PDB site
Description: crystal structures of the n-terminal fragment from moloney murine leukemia virus reverse transcriptase complexed with nucleic acid: functional implications for template-primer binding to the fingers domain
Class: transferase/DNA
Keywords: protein-DNA complex, polymerase, reverse transcriptase, moloney murine leukemia virus, transferase-DNA complex
Deposited on 1999-03-12, released 2000-03-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-07-08.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.233
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: reverse transcriptase
    Species: Murine leukemia virus [TaxId:11801]
    Gene: MMLV-RT
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1qaia_
  • Chain 'B':
    Compound: reverse transcriptase
    Species: Murine leukemia virus [TaxId:11801]
    Gene: MMLV-RT
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1qaib_
  • Chain 'C':
    Compound: DNA (5'-d(*cp*ap*tp*gp*cp*ap*tp*g)-3')
  • Chain 'D':
    Compound: DNA (5'-d(*cp*ap*tp*gp*cp*ap*tp*g)-3')
  • Heterogens: HG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1qaiA (A:)
lhetskepdvslgstwlsdfpqawaetggmglavrqapliiplkatstpvsikqypmsqe
arlgikphiqrlldqgilvpcqspwntpllpvkkpgtndyrpvqdlrevnkrvedihptv
pnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlp
qgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgn
lgyrasakkaqicqkqvkylgyllk

    Sequence, based on observed residues (ATOM records): (download) 
    >1qaiA (A:)
twlsdfpqawaetggmglavrqapliiplkatstpvsikqypmsqearlgikphiqrlld
qgilvpcqspwntpllpvkkpgtndyrpvqdlrevnkrvedihptvpnpynllsglppsh
qwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdeal
hrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicq
kqvkylgyllk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1qaiB (B:)
lhetskepdvslgstwlsdfpqawaetggmglavrqapliiplkatstpvsikqypmsqe
arlgikphiqrlldqgilvpcqspwntpllpvkkpgtndyrpvqdlrevnkrvedihptv
pnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlp
qgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgn
lgyrasakkaqicqkqvkylgyllk

    Sequence, based on observed residues (ATOM records): (download) 
    >1qaiB (B:)
twlsdfpqawaetggmglavrqapliiplkatstpvsikqypmsqearlgikphiqrlld
qgilvpcqspwntpllpvkkpgtndyrpvqdlrevnkrvedihptvpnpynllsglppsh
qwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdeal
hrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicq
kqvkylgyllk

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.