PDB entry 1qaf

View 1qaf on RCSB PDB site
Description: the active site base controls cofactor reactivity in escherichia coli amine oxidase : x-ray crystallographic studies with mutational variants
Class: oxidoreductase
Keywords: catalytic domain mainly anti-parallel beta sheet, three peripheral alpha-beta domains
Deposited on 1999-03-11, released 1999-08-23
The last revision prior to the SCOP 1.75 freeze date was dated 2003-12-16, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.179
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (copper amine oxidase)
    Species: Escherichia coli
    Gene: maoA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P46883
      • engineered (377)
      • modified residue (460)
    Domains in SCOP 1.75: d1qafa1, d1qafa2, d1qafa3, d1qafa4
  • Chain 'B':
    Compound: protein (copper amine oxidase)
    Species: Escherichia coli
    Gene: maoA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P46883 (0-720)
      • engineered (377)
      • modified residue (460)
    Domains in SCOP 1.75: d1qafb1, d1qafb2, d1qafb3, d1qafb4
  • Heterogens: CU, CA, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1qafA (A:)
hmvpmdktlkefgadvqwddyaqlftlikdgayvkvkpgaqtaivngqplalqvpvvmkd
nkawvsdtfindvfqsgldqtfqvekrphplnaltadeikqaveivkasadfkpntrfte
isllppdkeavwafalenkpvdqprkadvimldgkhiieavvdlqnnkllswqpikdahg
mvllddfasvqniinnseefaaavkkrgitdakkvittpltvgyfdgkdglkqdarllkv
isyldvgdgnywahpienlvavvdleqkkivkieegpvvpvpmtarpfdgrdrvapavkp
mqiiepegknytitgdmihwrnwdfhlsmnsrvgpmistvtyndngtkrkvmyegslggm
ivpygdpdigwyfkaylesgdygmgtltspiargkdapsnavllnetiadytgvpmeipr
aiavferyagpeykhqemgqpnvsterrelvvrwistvgnydyifdwifhengtigidag
atgieavkgvkaktmhdetakddtrygtlidhnivgtthqhiynfrldldvdgennslva
mdpvvkpntaggprtstmqvnqynigneqdaaqkfdpgtirllsnpnkenrmgnpvsyqi
ipyaggthpvakgaqfapdewiyhrlsfmdkqlwvtryhpgerfpegkypnrsthdtglg
qyskdnesldntdavvwmttgtthvaraeewpimptewvhtllkpwnffdetptlgalkk
d

    Sequence, based on observed residues (ATOM records): (download) 
    >1qafA (A:)
mvpmdktlkefgadvqwddyaqlftlikdgayvkvkpgaqtaivngqplalqvpvvmkdn
kawvsdtfindvfqsgldqtfqvekrphplnaltadeikqaveivkasadfkpntrftei
sllppdkeavwafalenkpvdqprkadvimldgkhiieavvdlqnnkllswqpikdahgm
vllddfasvqniinnseefaaavkkrgitdakkvittpltvgyfdgkdglkqdarllkvi
syldvgdgnywahpienlvavvdleqkkivkieegpvvpvpmtarpfdgrdrvapavkpm
qiiepegknytitgdmihwrnwdfhlsmnsrvgpmistvtyndngtkrkvmyegslggmi
vpygdpdigwyfkaylesgdygmgtltspiargkdapsnavllnetiadytgvpmeipra
iavferyagpeykhqemgqpnvsterrelvvrwistvgnydyifdwifhengtigidaga
tgieavkgvkaktmhdetakddtrygtlidhnivgtthqhiynfrldldvdgennslvam
dpvvkpntaggprtstmqvnqynigneqdaaqkfdpgtirllsnpnkenrmgnpvsyqii
pyaggthpvakgaqfapdewiyhrlsfmdkqlwvtryhpgerfpegkypnrsthdtglgq
yskdnesldntdavvwmttgtthvaraeewpimptewvhtllkpwnffdetptlgalkk

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1qafB (B:)
hmvpmdktlkefgadvqwddyaqlftlikdgayvkvkpgaqtaivngqplalqvpvvmkd
nkawvsdtfindvfqsgldqtfqvekrphplnaltadeikqaveivkasadfkpntrfte
isllppdkeavwafalenkpvdqprkadvimldgkhiieavvdlqnnkllswqpikdahg
mvllddfasvqniinnseefaaavkkrgitdakkvittpltvgyfdgkdglkqdarllkv
isyldvgdgnywahpienlvavvdleqkkivkieegpvvpvpmtarpfdgrdrvapavkp
mqiiepegknytitgdmihwrnwdfhlsmnsrvgpmistvtyndngtkrkvmyegslggm
ivpygdpdigwyfkaylesgdygmgtltspiargkdapsnavllnetiadytgvpmeipr
aiavferyagpeykhqemgqpnvsterrelvvrwistvgnydyifdwifhengtigidag
atgieavkgvkaktmhdetakddtrygtlidhnivgtthqhiynfrldldvdgennslva
mdpvvkpntaggprtstmqvnqynigneqdaaqkfdpgtirllsnpnkenrmgnpvsyqi
ipyaggthpvakgaqfapdewiyhrlsfmdkqlwvtryhpgerfpegkypnrsthdtglg
qyskdnesldntdavvwmttgtthvaraeewpimptewvhtllkpwnffdetptlgalkk
d