PDB entry 1q9o
View 1q9o on RCSB PDB site
Description: S45-18 Fab Unliganded
Class: immune system
Keywords: antigen-binding fragment, Fab, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, IMMUNE SYSTEM
Deposited on
2003-08-25, released
2004-01-27
The last revision prior to the SCOPe 2.04 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.79 Å
R-factor: 0.22
AEROSPACI score: 0.48
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: S45-2 Fab (IgG1k) light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1q9oa1, d1q9oa2 - Chain 'B':
Compound: S45-2 Fab (IgG1k) heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1q9ob1, d1q9ob2 - Chain 'C':
Compound: S45-2 Fab (IgG1k) light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1q9oc1, d1q9oc2 - Chain 'D':
Compound: S45-2 Fab (IgG1k) heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1q9od1, d1q9od2 - Heterogens: MG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1q9oA (A:)
divmsqfpsslavsagekvtmsckssqsllnsrtrksylawyqqkpgqfpklliywaatr
esgvpdrftgsgsgtdftltissvqaedlavyyckqsynlrtfgggtkleikradaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysm
sstltltkdeyerhnsytceathktstspivksfnrnec
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1q9oB (B:)
evilvesggglvqpggslrlscstsgftftdyymswvrqppgkalewlgfirnkpkgytt
eysasvkgrftisrdnsqsilylqmntlraedsatyycvrdiysfgsrdgmdywgqgtsv
tvssakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpav
lqsdlytlsssvtvpsstwpsetvtcnvahpasstkvdkkivprdc
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1q9oC (C:)
divmsqfpsslavsagekvtmsckssqsllnsrtrksylawyqqkpgqfpklliywaatr
esgvpdrftgsgsgtdftltissvqaedlavyyckqsynlrtfgggtkleikradaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysm
sstltltkdeyerhnsytceathktstspivksfnrnec
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1q9oD (D:)
evilvesggglvqpggslrlscstsgftftdyymswvrqppgkalewlgfirnkpkgytt
eysasvkgrftisrdnsqsilylqmntlraedsatyycvrdiysfgsrdgmdywgqgtsv
tvssakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpav
lqsdlytlsssvtvpsstwpsetvtcnvahpasstkvdkkivprdc