PDB entry 1q8i

View 1q8i on RCSB PDB site
Description: Crystal structure of ESCHERICHIA coli DNA Polymerase II
Class: transferase
Keywords: DNA Polymerase II, Structural Genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, TRANSFERASE
Deposited on 2003-08-21, released 2004-01-27
The last revision prior to the SCOPe 2.03 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.199
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase II
    Species: Escherichia coli [TaxId:562]
    Gene: POLB OR DINA OR B0060
    Database cross-references and differences (RAF-indexed):
    • Uniprot P21189 (Start-782)
      • engineered (427)
    Domains in SCOPe 2.03: d1q8ia1, d1q8ia2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1q8iA (A:)
maqagfiltrhwrdtpqgtevsfwlatdngplqvtlapqesvafipadqvpraqhilqge
qgfrltplalkdfhrqpvyglycrahrqlmnyekrlreggvtvyeadvrpperylmerfi
tspvwvegdmhngtivnarlkphpdyrpplkwvsidiettrhgelyciglegcgqrivym
lgpengdassldfeleyvasrpqlleklnawfanydpdviigwnvvqfdlrmlqkhaery
rlplrlgrdnselewrehgfkngvffaqakgrliidgiealksafwnfssfsletvaqel
lgegksidnpwdrmdeidrrfaedkpalatynlkdcelvtqifhkteimpflleratvng
lpvdrhggsvaafghlyfprmhragyvapnlgevpphaspggyvmdsrpglydsvlvldy
kslypsivrtflidpvglvegmaqpdpehstegfldawfsrekhclpeivtniwhgrdea
krqgnkplsqalkiimnafygvlgttacrffdprlassitmrghqimrqtkalieaqgyd
viygdtdstfvwlkgahseeeaakigralvqhvnawwaetlqkqrltsaleleyethfcr
flmptirgadtgskkryagliqegdkqrmvfkgletvrtdwtplaqqfqqelylrifrne
pyqeyvretidklmageldarlvyrkrlrrplseyqrnvpphvraarladeenqkrgrpl
qyqnrgtikyvwttngpepldyqrspldyehyltrqlqpvaegilpfiednfatlmtgql
glf

    Sequence, based on observed residues (ATOM records): (download) 
    >1q8iA (A:)
aqagfiltrhwrdtpqgtevsfwlatdngplqvtlapqesvafipadqvpraqhilqgeq
gfrltplalkdfhrqpvyglycrahrqlmnyekrlreggvtvyeadvrpperylmerfit
spvwvegdmhngtivnarlkphpdyrpplkwvsidiettrhgelyciglegcgqrivyml
gpengdassldfeleyvasrpqlleklnawfanydpdviigwnvvqfdlrmlqkhaeryr
lplrlgrdnselewrehgfkngvffaqakgrliidgiealksafwnfssfsletvaqell
mdeidrrfaedkpalatynlkdcelvtqifhkteimpflleratvnglpvdrhggsvaaf
ghlyfprmhragyvapnlgevpphaspggyvmdsrpglydsvlvldykslypsivrtfli
dpvglvegmaqpdpehstegfldawfsrekhclpeivtniwhgrdeakrqgnkplsqalk
iimnafygvlgttacrffdprlassitmrghqimrqtkalieaqgydviygdtdstfvwl
kgahseeeaakigralvqhvnawwaetlqkqrltsaleleyethfcrflmptirgadtgs
kkryagliqegdkqrmvfkglettdwtplaqqfqqelylrifrnepyqeyvretidklma
geldarlvyspldyehyltrqlqpvaegilpfiednfatlmtgqlglf