PDB entry 1q7d

View 1q7d on RCSB PDB site
Description: Structure of the integrin alpha2beta1 binding collagen peptide
Class: contractile protein
Keywords: collagen, integrin, triplehelix
Deposited on 2003-08-18, released 2004-01-13
The last revision prior to the SCOP 1.73 freeze date was dated 2004-01-13, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.236
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: collagen alfa 1(I) chain peptide GPOGPOGFOGERGPOGPOGPO
  Species: synthetic, synthetic
  Database cross-references and differences (RAF-indexed):
  • Uniprot P02452 (6-11)
    • see remark 999 (0-5)
    • modified residue (8)
    • see remark 999 (12-20)
  Domains in SCOP 1.73: d1q7da_
• Chain 'B':
  Compound: collagen alfa 1(I) chain peptide GPOGPOGFOGERGPOGPOGPO
  Species: synthetic, synthetic
  Database cross-references and differences (RAF-indexed):
  • Uniprot P02452 (6-11)
    • see remark 999 (0-5)
    • modified residue (8)
    • see remark 999 (12-20)
  Domains in SCOP 1.73: d1q7db_
• Chain 'C':
  Compound: collagen alfa 1(I) chain peptide GPOGPOGFOGERGPOGPOGPO
  Species: synthetic, synthetic
  Database cross-references and differences (RAF-indexed):
  • Uniprot P02452 (6-11)
    • see remark 999 (0-5)
    • modified residue (8)
    • see remark 999 (12-19)
  Domains in SCOP 1.73: d1q7dc_
• Heterogens: ACE, NH2, HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1q7dA (A:)
  gppgppgfpgergppgppgpp
  

  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1q7dB (B:)
  gppgppgfpgergppgppgpp
  

  
  
• Chain 'C':
  Sequence, based on SEQRES records: (download)
  

  >1q7dC (C:)
  gppgppgfpgergppgppgpp
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >1q7dC (C:)
  gppgppgfpgergppgppgp