PDB entry 1q47

View 1q47 on RCSB PDB site
Description: Structure of the Semaphorin 3A Receptor-Binding Module
Class: signaling protein
Keywords: beta propeller, SIGNALING PROTEIN
Deposited on 2003-08-01, released 2004-08-03
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.249
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Semaphorin 3A
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1q47a_
  • Chain 'B':
    Compound: Semaphorin 3A
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1q47b_
  • Heterogens: NAG

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1q47A (A:)
knnvprlklsykemlesnnvitfnglansssyhtflldeersrlyvgakdhifsfnlvni
kdfqkivwpvsytrrdeckwagkdilkecanfikvleaynqthlyacgtgafhpictyie
vghhpednifklqdshfengrgkspydpklltasllidgelysgtaadfmgrdfaifrtl
ghhhpirteqhdsrwlndprfisahlipesdnpeddkvyfffrenaidgehsgkathari
gqickndfgghrslvnkwttflkarlicsvpgpngidthfdelqdvflmnskdpknpivy
gvfttssnifkgsavcmysmsdvrrvflgpyahrdgpnyqwvpyqgrvpyprpgtcpskt
fggfdstkdlpddvitfarshpamynpvfpinnrpimiktdvnyqftqivvdrvdaedgq
ydvmfigtdvgtvlkvvsvpketwhdleevlleemtvfrepttisamelstkqqqlyigs
tagvaqlplhrcdiy

    Sequence, based on observed residues (ATOM records): (download) 
    >1q47A (A:)
knnvprlklsykemlesnnvitfnglansssyhtflldeersrlyvgakdhifsfnlvni
kdfqkivwpvsytrrdeckwagkdilkecanfikvleaynqthlyacgtgafhpictyie
vghhpednifklqdshfengrgkspydpklltasllidgelysgtaadfmgrdfaifrtl
ghhhpirteqhdsrwlndprfisahlipesdnpeddkvyfffrenaidgehsgkathari
gqickndfgghrslvnkwttflkarlicsvpgpngidthfdelqdvflmnskdpknpivy
gvfttssnifkgsavcmysmsdvrrvflgpyahrdgpnyqwvpyqgrvpyprpgtcpskt
fggfdstkdlpddvitfarshpamynpvfpinnrpimiktdvnyqftqivvdrvdaedgq
ydvmfigtdvgtvlkvvsvlleemtvfrepttisamelstkqqqlyigstagvaqlplhr
cdiy

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1q47B (B:)
knnvprlklsykemlesnnvitfnglansssyhtflldeersrlyvgakdhifsfnlvni
kdfqkivwpvsytrrdeckwagkdilkecanfikvleaynqthlyacgtgafhpictyie
vghhpednifklqdshfengrgkspydpklltasllidgelysgtaadfmgrdfaifrtl
ghhhpirteqhdsrwlndprfisahlipesdnpeddkvyfffrenaidgehsgkathari
gqickndfgghrslvnkwttflkarlicsvpgpngidthfdelqdvflmnskdpknpivy
gvfttssnifkgsavcmysmsdvrrvflgpyahrdgpnyqwvpyqgrvpyprpgtcpskt
fggfdstkdlpddvitfarshpamynpvfpinnrpimiktdvnyqftqivvdrvdaedgq
ydvmfigtdvgtvlkvvsvpketwhdleevlleemtvfrepttisamelstkqqqlyigs
tagvaqlplhrcdiy