PDB entry 1q39

View 1q39 on RCSB PDB site
Description: Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli: The WT enzyme at 2.8 resolution.
Class: hydrolase
Keywords: hydrolase
Deposited on 2003-07-29, released 2004-08-03
The last revision prior to the SCOP 1.75 freeze date was dated 2005-09-20, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.216
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Endonuclease VIII
    Species: Escherichia coli
    Gene: nei
    Database cross-references and differences (RAF-indexed):
    • Uniprot P50465 (Start-261)
      • see remark 999 (33)
      • see remark 999 (111)
    Domains in SCOP 1.75: d1q39a1, d1q39a2, d1q39a3
  • Heterogens: ZN, CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1q39A (A:)
pegpeirraadnleaaikgkpltdvwfafpqlktyqsqligqhvthvetrgkallthfsn
dltlyshnqlygvwrvvdtgeepqttrvlrvklqtadktillysasdiemlrpeqltthp
flqrvgpdvldpnltpevvkerllsprfrnrqfagllldqaflaglgnylrveilwqvgl
tgnhkakdlnaaqldalahalleiprfsyatrgqvdenkhhgalfrfkvfhrdgepcerc
gsiiekttlssrpfywcpgcqh

    Sequence, based on observed residues (ATOM records): (download) 
    >1q39A (A:)
peirraadnleaaikgkpltdvwfafpqlktyqsqligqhvthvetrgkallthfsndlt
lyshnqlygvwrvvdtgeettrvlrvklqtadktillysasdiemlrpeqltthpflqrv
gpdvldpnltpevvkerllsprfrnrqfagllldqaflaglgnylrveilwqvgltgnhk
akdlnaaqldalahalleiprfsyatrgqvdenkhhgalfrfkvfhrdgepcercgsiie
kttlssrpfywcpgcqh