PDB entry 1q17

View 1q17 on RCSB PDB site
Description: Structure of the yeast Hst2 protein deacetylase in ternary complex with 2'-O-acetyl ADP ribose and histone peptide
Class: Hydrolase
Keywords: histone deacetylase, Hydrolase
Deposited on 2003-07-18, released 2003-11-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-11-16, with a file datestamp of 2011-11-11.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.186
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: HST2 protein
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: HST2 OR YPL015C OR LPA2C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P53686 (6-299)
      • expression tag (2-5)
    Domains in SCOPe 2.08: d1q17a1, d1q17a2
  • Chain 'B':
    Compound: HST2 protein
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: HST2 OR YPL015C OR LPA2C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P53686 (6-299)
      • expression tag (0-5)
    Domains in SCOPe 2.08: d1q17b1, d1q17b2
  • Chain 'C':
    Compound: HST2 protein
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: HST2 OR YPL015C OR LPA2C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P53686 (6-299)
      • expression tag (1-5)
    Domains in SCOPe 2.08: d1q17c1, d1q17c2
  • Heterogens: ZN, CL, APR, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1q17A (A:)
hhgmasmsvstastemsvrkiaahmksnpnakvifmvgagistscgipdfrspgtglyhn
larlklpypeavfdvdffqsdplpfytlakelypgnfrpskfhyllklfqdkdvlkrvyt
qnidtlerqagvkddliieahgsfahchcigcgkvyppqvfksklaehpikdfvkcdvcg
elvkpaivffgedlpdsfsetwlndsewlrekittsgkhpqqplvivvgtslavypfasl
peeiprkvkrvlcnletvgdfkankrptdlivhqysdefaeqlveelgwqedfekiltaq

    Sequence, based on observed residues (ATOM records): (download) 
    >1q17A (A:)
gmasmsvstastemsvrkiaahmksnpnakvifmvgagistscgipdfrspgtglyhnla
rlklpypeavfdvdffqsdplpfytlakelypgnfrpskfhyllklfqdkdvlkrvytqn
idtlerqagvkddliieahgsfahchcigcgkvyppqvfksklaehpikdfvkcdvcgel
vkpaivffgedlpdsfsetwlndsewlrekiqplvivvgtslavypfaslpeeiprkvkr
vlcnletvgdfkankrptdlivhqysdefaeqlveelgwqedfekiltaq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1q17B (B:)
hhgmasmsvstastemsvrkiaahmksnpnakvifmvgagistscgipdfrspgtglyhn
larlklpypeavfdvdffqsdplpfytlakelypgnfrpskfhyllklfqdkdvlkrvyt
qnidtlerqagvkddliieahgsfahchcigcgkvyppqvfksklaehpikdfvkcdvcg
elvkpaivffgedlpdsfsetwlndsewlrekittsgkhpqqplvivvgtslavypfasl
peeiprkvkrvlcnletvgdfkankrptdlivhqysdefaeqlveelgwqedfekiltaq

    Sequence, based on observed residues (ATOM records): (download) 
    >1q17B (B:)
hhgmasmsvstastemsvrkiaahmksnpnakvifmvgagistscgipdfrspgtglyhn
larlklpypeavfdvdffqsdplpfytlakelypgnfrpskfhyllklfqdkdvlkrvyt
qnidtlerqagvkddliieahgsfahchcigcgkvyppqvfksklaehpikdfvkcdvcg
elvkpaivffgedlpdsfsetwlndsewlrekipqqplvivvgtslavypfaslpeeipr
kvkrvlcnletvgdfkankrptdlivhqysdefaeqlveelgwqedfekiltaq

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1q17C (C:)
hhgmasmsvstastemsvrkiaahmksnpnakvifmvgagistscgipdfrspgtglyhn
larlklpypeavfdvdffqsdplpfytlakelypgnfrpskfhyllklfqdkdvlkrvyt
qnidtlerqagvkddliieahgsfahchcigcgkvyppqvfksklaehpikdfvkcdvcg
elvkpaivffgedlpdsfsetwlndsewlrekittsgkhpqqplvivvgtslavypfasl
peeiprkvkrvlcnletvgdfkankrptdlivhqysdefaeqlveelgwqedfekiltaq

    Sequence, based on observed residues (ATOM records): (download) 
    >1q17C (C:)
hgmasmsvstastemsvrkiaahmksnpnakvifmvgagistscgipdfrspgtglyhnl
arlklpypeavfdvdffqsdplpfytlakelypgnfrpskfhyllklfqdkdvlkrvytq
nidtlerqagvkddliieahgsfahchcigcgkvyppqvfksklaehpikdfvkcdvcge
lvkpaivffgedlpdsfsetwlndsewlrekikhpqqplvivvgtslavypfaslpeeip
rkvkrvlcnletvgdfkankrptdlivhqysdefaeqlveelgwqedfekiltaq