PDB entry 1pyu

View 1pyu on RCSB PDB site
Description: Processed Aspartate Decarboxylase Mutant with Ser25 mutated to Cys
Class: lyase
Keywords: Auto-processing, Aspartate Decarboxylase, pyruvoyl, LYASE
Deposited on 2003-07-09, released 2003-11-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.174
AEROSPACI score: -1.5 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Aspartate 1-decarboxylase beta chain
    Species: Escherichia coli [TaxId:562]
    Gene: PAND
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A790 (17-40)
      • expression tag (13-16)
    Domains in SCOPe 2.08: d1pyu.1
  • Chain 'B':
    Compound: Aspartate 1-decarboxylase alfa chain
    Species: Escherichia coli [TaxId:562]
    Gene: PAND
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A790 (0-End)
      • engineered (0)
    Domains in SCOPe 2.08: d1pyu.1
  • Chain 'C':
    Compound: Aspartate 1-decarboxylase beta chain
    Species: Escherichia coli [TaxId:562]
    Gene: PAND
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1pyu.2
  • Chain 'D':
    Compound: Aspartate 1-decarboxylase alfa chain
    Species: Escherichia coli [TaxId:562]
    Gene: PAND
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A790 (0-End)
      • engineered (0)
    Domains in SCOPe 2.08: d1pyu.2
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1pyuA (A:)
mrgshhhhhhglvprgsmirtmlqgklhrvkvthadlhyeg

    Sequence, based on observed residues (ATOM records): (download) 
    >1pyuA (A:)
prgsmirtmlqgklhrvkvthadlhyeg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1pyuB (B:)
ccaidqdfldaagileneaidiwnvtngkrfstyaiaaergsriisvngaaahcasvgdi
viiasfvtmpdeeartwrpnvayfegdnemkrtakaipvqva

    Sequence, based on observed residues (ATOM records): (download) 
    >1pyuB (B:)
ccaidqdfldaagileneaidiwnvtngkrfstyaiaaergsriisvngaaahcasvgdi
viiasfvtmpdeeartwrpnvayfegdnemkr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1pyuC (C:)
mrgshhhhhhglvprgsmirtmlqgklhrvkvthadlhyeg

    Sequence, based on observed residues (ATOM records): (download) 
    >1pyuC (C:)
mirtmlqgklhrvkvthadlhyeg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1pyuD (D:)
ccaidqdfldaagileneaidiwnvtngkrfstyaiaaergsriisvngaaahcasvgdi
viiasfvtmpdeeartwrpnvayfegdnemkrtakaipvqva

    Sequence, based on observed residues (ATOM records): (download) 
    >1pyuD (D:)
ccaidqdfldaagileneaidiwnvtngkrfstyaiaaergsriisvngaaahcasvgdi
viiasfvtmpdeeartwrpnvayfegdnemk