PDB entry 1pyo
View 1pyo on RCSB PDB site
Description: Crystal Structure of Human Caspase-2 in Complex with Acetyl-Leu-Asp-Glu-Ser-Asp-cho
Class: hydrolase/hydrolase inhibitor
Keywords: apoptosis, caspase, alpha-beta, thiol protease, hydrolase-hydrolase inhibitor complex
Deposited on
2003-07-09, released
2003-08-26
The last revision prior to the SCOPe 2.08 freeze date was dated
2013-07-03, with a file datestamp of
2013-06-28.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: 0.189
AEROSPACI score: 0.56
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Caspase-2
Species: Homo sapiens [TaxId:9606]
Gene: CASP2 OR ICH1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1pyo.1 - Chain 'B':
Compound: Caspase-2
Species: Homo sapiens [TaxId:9606]
Gene: CASP2 OR ICH1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1pyo.1 - Chain 'C':
Compound: Caspase-2
Species: Homo sapiens [TaxId:9606]
Gene: CASP2 OR ICH1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1pyo.2 - Chain 'D':
Compound: Caspase-2
Species: Homo sapiens [TaxId:9606]
Gene: CASP2 OR ICH1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1pyo.2 - Chain 'E':
Compound: acetyl-leu-asp-glu-ser-asj
Species: Saccharomyces cerevisiae (Baker's yeast), synthetic [TaxId:559292]
Database cross-references and differences (RAF-indexed):
- Chain 'F':
Compound: acetyl-leu-asp-glu-ser-asj
Species: Saccharomyces cerevisiae (Baker's yeast), synthetic [TaxId:559292]
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1pyoA (A:)
nkdgpvclqvkpctpefyqthfqlayrlqsrprglalvlsnvhftgekelefrsggdvdh
stlvtlfkllgydvhvlcdqtaqemqeklqnfaqlpahrvtdscivallshgvegaiygv
dgkllqlqevfqlfdnancpslqnkpkmffiqacrgdetdrgvdqqd
Sequence, based on observed residues (ATOM records): (download)
>1pyoA (A:)
lqvkpctpefyqthfqlayrlqsrprglalvlsnvhftgekelefrsggdvdhstlvtlf
kllgydvhvlcdqtaqemqeklqnfaqlpahrvtdscivallshgvegaiygvdgkllql
qevfqlfdnancpslqnkpkmffiqacrgdetdrgvdqq
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1pyoB (B:)
agkeklpkmrlptrsdmicgyaclkgtaamrntkrgswyiealaqvfseracdmhvadml
vkvnalikdregyapgtefhrckemseycstlcrhlylfpghppt
Sequence, based on observed residues (ATOM records): (download)
>1pyoB (B:)
pkmrlptrsdmicgyaclkgtaamrntkrgswyiealaqvfseracdmhvadmlvkvnal
ikdregyapgtefhrckemseycstlcrhlylfpghpp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1pyoC (C:)
nkdgpvclqvkpctpefyqthfqlayrlqsrprglalvlsnvhftgekelefrsggdvdh
stlvtlfkllgydvhvlcdqtaqemqeklqnfaqlpahrvtdscivallshgvegaiygv
dgkllqlqevfqlfdnancpslqnkpkmffiqacrgdetdrgvdqqd
Sequence, based on observed residues (ATOM records): (download)
>1pyoC (C:)
clqvkpctpefyqthfqlayrlqsrprglalvlsnvhftgekelefrsggdvdhstlvtl
fkllgydvhvlcdqtaqemqeklqnfaqlpahrvtdscivallshgvegaiygvdgkllq
lqevfqlfdnancpslqnkpkmffiqacrgdetdrgvdqqd
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1pyoD (D:)
agkeklpkmrlptrsdmicgyaclkgtaamrntkrgswyiealaqvfseracdmhvadml
vkvnalikdregyapgtefhrckemseycstlcrhlylfpghppt
Sequence, based on observed residues (ATOM records): (download)
>1pyoD (D:)
pkmrlptrsdmicgyaclkgtaamrntkrgswyiealaqvfseracdmhvadmlvkvnal
ikdregyapgtefhrckemseycstlcrhlylfpghppt
- Chain 'E':
No sequence available.
- Chain 'F':
No sequence available.