PDB entry 1pyh

View 1pyh on RCSB PDB site
Description: Crystal structure of RC-LH1 core complex from Rhodopseudomonas palustris
Deposited on 2003-07-08, released 2004-03-02
The last revision was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 4.8 Å
R-factor: N/A
AEROSPACI score: 0.04 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Compound: Light-harvesting protein B-800/850, alpha chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-25)
  • Chain '2':
    Compound: Light-harvesting protein B-800/850, beta chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-29)
  • Chain '3':
    Compound: Light-harvesting protein B-800/850, alpha chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-25)
  • Chain '4':
    Compound: Light-harvesting protein B-800/850, beta chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-29)
  • Chain '5':
    Compound: Light-harvesting protein B-800/850, alpha chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-25)
  • Chain '6':
    Compound: Light-harvesting protein B-800/850, beta chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-29)
  • Chain '7':
    Compound: Light-harvesting protein B-800/850, alpha chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-25)
  • Chain '8':
    Compound: Light-harvesting protein B-800/850, beta chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-29)
  • Chain 'A':
    Compound: reaction center protein l chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-280)
  • Chain 'B':
    Compound: reaction center protein m chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-301)
  • Chain 'C':
    Compound: reaction center protein h chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-240)
  • Chain 'D':
    Compound: Light-harvesting protein B-800/850, alpha chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-25)
  • Chain 'E':
    Compound: Light-harvesting protein B-800/850, beta chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-29)
  • Chain 'F':
    Compound: Light-harvesting protein B-800/850, alpha chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-25)
  • Chain 'G':
    Compound: Light-harvesting protein B-800/850, beta chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-29)
  • Chain 'H':
    Compound: Light-harvesting protein B-800/850, alpha chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-25)
  • Chain 'I':
    Compound: Light-harvesting protein B-800/850, beta chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-29)
  • Chain 'J':
    Compound: Light-harvesting protein B-800/850, alpha chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-25)
  • Chain 'K':
    Compound: Light-harvesting protein B-800/850, beta chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-29)
  • Chain 'L':
    Compound: Light-harvesting protein B-800/850, alpha chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-25)
  • Chain 'M':
    Compound: Light-harvesting protein B-800/850, beta chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-29)
  • Chain 'N':
    Compound: Light-harvesting protein B-800/850, alpha chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-25)
  • Chain 'O':
    Compound: Light-harvesting protein B-800/850, beta chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-29)
  • Chain 'P':
    Compound: Light-harvesting protein B-800/850, alpha chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-25)
  • Chain 'Q':
    Compound: Light-harvesting protein B-800/850, beta chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-29)
  • Chain 'R':
    Compound: Light-harvesting protein B-800/850, alpha chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-25)
  • Chain 'S':
    Compound: Light-harvesting protein B-800/850, beta chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-29)
  • Chain 'T':
    Compound: Light-harvesting protein B-800/850, alpha chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-25)
  • Chain 'U':
    Compound: Light-harvesting protein B-800/850, beta chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-29)
  • Chain 'V':
    Compound: Light-harvesting protein B-800/850, alpha chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-25)
  • Chain 'W':
    Compound: Light-harvesting protein B-800/850, beta chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-29)
  • Chain 'X':
    Compound: Light-harvesting protein B-800/850, alpha chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-25)
  • Chain 'Y':
    Compound: Light-harvesting protein B-800/850, beta chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-29)
  • Chain 'Z':
    Compound: Light-harvesting protein B-800/850, alpha chain
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Database cross-references and differences (RAF-indexed):
    • PDB 1PYH (0-25)
  • Heterogens: FE, BCL, BPH

PDB Chain Sequences:
This PDB entry is not classified in SCOP 1.69, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain '1':
    Sequence; same for both SEQRES and ATOM records:
    >1pyh1 (1:)
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  • Chain '2':
    Sequence; same for both SEQRES and ATOM records:
    >1pyh2 (2:)
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  • Chain '3':
    Sequence; same for both SEQRES and ATOM records:
    >1pyh3 (3:)
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  • Chain '4':
    Sequence; same for both SEQRES and ATOM records:
    >1pyh4 (4:)
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  • Chain '5':
    Sequence; same for both SEQRES and ATOM records:
    >1pyh5 (5:)
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  • Chain '6':
    Sequence; same for both SEQRES and ATOM records:
    >1pyh6 (6:)
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  • Chain '7':
    Sequence; same for both SEQRES and ATOM records:
    >1pyh7 (7:)
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  • Chain '8':
    Sequence; same for both SEQRES and ATOM records:
    >1pyh8 (8:)
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  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhA (A:)
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  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhB (B:)
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xx

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhC (C:)
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x

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhD (D:)
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  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhE (E:)
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  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhF (F:)
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  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhG (G:)
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  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhH (H:)
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  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhI (I:)
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  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhJ (J:)
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  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhK (K:)
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  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhL (L:)
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  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhM (M:)
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  • Chain 'N':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhN (N:)
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  • Chain 'O':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhO (O:)
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  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhP (P:)
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  • Chain 'Q':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhQ (Q:)
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  • Chain 'R':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhR (R:)
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  • Chain 'S':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhS (S:)
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  • Chain 'T':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhT (T:)
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  • Chain 'U':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhU (U:)
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  • Chain 'V':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhV (V:)
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  • Chain 'W':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhW (W:)
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  • Chain 'X':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhX (X:)
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  • Chain 'Y':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhY (Y:)
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  • Chain 'Z':
    Sequence; same for both SEQRES and ATOM records:
    >1pyhZ (Z:)
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