PDB entry 1py1

View 1py1 on RCSB PDB site
Description: Complex of GGA1-VHS domain and beta-secretase C-terminal phosphopeptide
Class: protein transport
Keywords: vhs domain of gga1, beta-secretase, protein-peptide complex, super helix, protein transport
Deposited on 2003-07-07, released 2003-11-04
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.236
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ADP-ribosylation factor binding protein GGA1
    Species: Homo sapiens [TaxId:9606]
    Gene: GGA1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1py1a_
  • Chain 'B':
    Compound: ADP-ribosylation factor binding protein GGA1
    Species: Homo sapiens [TaxId:9606]
    Gene: GGA1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1py1b_
  • Chain 'C':
    Compound: ADP-ribosylation factor binding protein GGA1
    Species: Homo sapiens [TaxId:9606]
    Gene: GGA1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1py1c_
  • Chain 'D':
    Compound: ADP-ribosylation factor binding protein GGA1
    Species: Homo sapiens [TaxId:9606]
    Gene: GGA1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1py1d_
  • Chain 'E':
    Compound: Beta-secretase
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56817 (Start-7)
      • modified residue (4)
  • Chain 'F':
    Compound: Beta-secretase
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56817 (Start-7)
      • modified residue (4)
  • Chain 'G':
    Compound: Beta-secretase
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56817 (Start-7)
      • modified residue (4)
  • Chain 'H':
    Compound: Beta-secretase
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56817 (Start-7)
      • modified residue (4)
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1py1A (A:)
gsepamepetlearinratnplnkeldwasingfceqlnedfegpplatrllahkiqspq
eweaiqaltvletcmkscgkrfhdevgkfrflnelikvvspkylgsrtsekvknkilell
yswtvglpeevkiaeayqmlkkqgivksdpklpddttf

    Sequence, based on observed residues (ATOM records): (download) 
    >1py1A (A:)
etlearinratnplnkeldwasingfceqlnedfegpplatrllahkiqspqeweaiqal
tvletcmkscgkrfhdevgkfrflnelikvvspkylgsrtsekvknkilellyswtvglp
eevkiaeayqmlkkqgivksdp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1py1B (B:)
gsepamepetlearinratnplnkeldwasingfceqlnedfegpplatrllahkiqspq
eweaiqaltvletcmkscgkrfhdevgkfrflnelikvvspkylgsrtsekvknkilell
yswtvglpeevkiaeayqmlkkqgivksdpklpddttf

    Sequence, based on observed residues (ATOM records): (download) 
    >1py1B (B:)
petlearinratnplnkeldwasingfceqlnedfegpplatrllahkiqspqeweaiqa
ltvletcmkscgkrfhdevgkfrflnelikvvspkylgsrtsekvknkilellyswtvgl
peevkiaeayqmlkkqgiv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1py1C (C:)
gsepamepetlearinratnplnkeldwasingfceqlnedfegpplatrllahkiqspq
eweaiqaltvletcmkscgkrfhdevgkfrflnelikvvspkylgsrtsekvknkilell
yswtvglpeevkiaeayqmlkkqgivksdpklpddttf

    Sequence, based on observed residues (ATOM records): (download) 
    >1py1C (C:)
etlearinratnplnkeldwasingfceqlnedfegpplatrllahkiqspqeweaiqal
tvletcmkscgkrfhdevgkfrflnelikvvspkylgsrtsekvknkilellyswtvglp
eevkiaeayqmlkkqgiv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1py1D (D:)
gsepamepetlearinratnplnkeldwasingfceqlnedfegpplatrllahkiqspq
eweaiqaltvletcmkscgkrfhdevgkfrflnelikvvspkylgsrtsekvknkilell
yswtvglpeevkiaeayqmlkkqgivksdpklpddttf

    Sequence, based on observed residues (ATOM records): (download) 
    >1py1D (D:)
etlearinratnplnkeldwasingfceqlnedfegpplatrllahkiqspqeweaiqal
tvletcmkscgkrfhdevgkfrflnelikvvspkylgsrtsekvknkilellyswtvglp
eevkiaeayqmlkkqgivksdp

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.