PDB entry 1puf

View 1puf on RCSB PDB site
Description: Crystal Structure of HoxA9 and Pbx1 homeodomains bound to DNA
Class: Transcription/DNA
Keywords: Homeodomian, Protein-DNA complex, Hox Hexapeptide, TALE homeodomain, Homeodomain interaction, Transcription/DNA COMPLEX
Deposited on 2003-06-24, released 2003-09-02
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.233
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Homeobox protein Hox-A9
  Species: Mus musculus [TaxId:10090]
  Gene: HOXA9
  Database cross-references and differences (RAF-indexed):
  • Uniprot P09631 (0-76)
  Domains in SCOPe 2.07: d1pufa_
• Chain 'B':
  Compound: Pre-B-cell leukemia transcription factor-1
  Species: Homo sapiens [TaxId:9606]
  Gene: PBX1
  Database cross-references and differences (RAF-indexed):
  • Uniprot P40424 (0-72)
  Domains in SCOPe 2.07: d1pufb_
• Chain 'D':
  Compound: 5'-d(*ap*cp*tp*cp*tp*ap*tp*gp*ap*tp*tp*tp*ap*cp*gp*ap*cp*gp*cp*t)-3'
  
• Chain 'E':
  Compound: 5'-d(*tp*ap*gp*cp*gp*tp*cp*gp*tp*ap*ap*ap*tp*cp*ap*tp*ap*gp*ap*g)-3'
  
• Heterogens: HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1pufA (A:)
  nnpaanwlharstrkkrcpytkhqtlelekeflfnmyltrdrryevarllnlterqvkiw
  fqnrrmkmkkinkdrak
  

  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1pufB (B:)
  arrkrrnfnkqateilneyfyshlsnpypseeakeelakkcgitvsqvsnwfgnkriryk
  knigkfqeeaniy
  

  
  
• Chain 'D':
  No sequence available.
  
  
• Chain 'E':
  No sequence available.