PDB entry 1pfz

View 1pfz on RCSB PDB site
Description: proplasmepsin II from plasmodium falciparum
Class: aspartic protease zymogen
Keywords: aspartic proteinase zymogen, hemoglobinase, malaria, hydrolase, aspartyl protease, glycoprotein, aspartic protease zymogen
Deposited on 1998-07-07, released 1999-01-13
The last revision prior to the SCOPe 2.01 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: 0.214
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: proplasmepsin II
    Species: Plasmodium falciparum [TaxId:5833]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1pfza_
  • Chain 'B':
    Compound: proplasmepsin II
    Species: Plasmodium falciparum [TaxId:5833]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1pfzb_
  • Chain 'C':
    Compound: proplasmepsin II
    Species: Plasmodium falciparum [TaxId:5833]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1pfzc_
  • Chain 'D':
    Compound: proplasmepsin II
    Species: Plasmodium falciparum [TaxId:5833]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1pfzd_
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1pfzA (A:)
grgsehltigfkvenahdrilktikthklknyikesvnflnsgltktnylgssndnielv
dfqnimfygdaevgdnqqpftfildtgsanlwvpsvkcttagcltkhlydssksrtyekd
gtkvemnyvsgtvsgffskdlvtvgnlslpykfievidtngfeptytastfdgilglgwk
dlsigsvdpivvelknqnkienalftfylpvhdkhtgfltiggieerfyegpltyeklnh
dlywqitldahvgnimlekancivdsgtsaitvptdflnkmlqnldvikvpflpfyvtlc
nnsklptfeftsengkytlepeyylqhiedvgpglcmlniigldfpvptfilgdpfmrky
ftvfdydnhsvgialakknl

    Sequence, based on observed residues (ATOM records): (download) 
    >1pfzA (A:)
hltigfkvenahdrilktikthklknyikesvnflnsgltktnylgssndnielvdfqni
mfygdaevgdnqqpftfildtgsanlwvpsvkcttagcltkhlydssksrtyekdgtkve
mtvsgffskdlvtvgnlslpykfievidtngfeptytastfdgilglgwkdlsigsvdpi
vvelknqnkienalftfylpvhdkhtgfltiggieerfyegpltyeklnhdlywqitlda
hvgnimlekancivdsgtsaitvptdflnkmlqnldvikvpflpfyvtlcnnsklptfef
tsengkytlepeyylqhiedvgpglcmlniigldfpvptfilgdpfmrkyftvfdydnhs
vgialakknl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1pfzB (B:)
grgsehltigfkvenahdrilktikthklknyikesvnflnsgltktnylgssndnielv
dfqnimfygdaevgdnqqpftfildtgsanlwvpsvkcttagcltkhlydssksrtyekd
gtkvemnyvsgtvsgffskdlvtvgnlslpykfievidtngfeptytastfdgilglgwk
dlsigsvdpivvelknqnkienalftfylpvhdkhtgfltiggieerfyegpltyeklnh
dlywqitldahvgnimlekancivdsgtsaitvptdflnkmlqnldvikvpflpfyvtlc
nnsklptfeftsengkytlepeyylqhiedvgpglcmlniigldfpvptfilgdpfmrky
ftvfdydnhsvgialakknl

    Sequence, based on observed residues (ATOM records): (download) 
    >1pfzB (B:)
ehltigfkvenahdrilktikthklknyikesvnflnsgltktnylgssndnielvdfqn
imfygdaevgdnqqpftfildtgsanlwvpsvkcttagcltkhlydssksrtyekdgtkv
emvsgffskdlvtvgnlslpykfievidtngfeptytastfdgilglgwkdlsigsvdpi
vvelknqnkienalftfylpvhdkhtgfltiggieerfyegpltyeklnhdlywqitlda
hvgnimlekancivdsgtsaitvptdflnkmlqnldvikvpflpfyvtlcnnsklptfef
tsengkytlepeyylqhiedvgpglcmlniigldfpvptfilgdpfmrkyftvfdydnhs
vgialakkn

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1pfzC (C:)
grgsehltigfkvenahdrilktikthklknyikesvnflnsgltktnylgssndnielv
dfqnimfygdaevgdnqqpftfildtgsanlwvpsvkcttagcltkhlydssksrtyekd
gtkvemnyvsgtvsgffskdlvtvgnlslpykfievidtngfeptytastfdgilglgwk
dlsigsvdpivvelknqnkienalftfylpvhdkhtgfltiggieerfyegpltyeklnh
dlywqitldahvgnimlekancivdsgtsaitvptdflnkmlqnldvikvpflpfyvtlc
nnsklptfeftsengkytlepeyylqhiedvgpglcmlniigldfpvptfilgdpfmrky
ftvfdydnhsvgialakknl

    Sequence, based on observed residues (ATOM records): (download) 
    >1pfzC (C:)
ehltigfkvenahdrilktikthklknyikesvnflnsgltvdfqnimfygdaevgdnqq
pftfildtgsanlwvpsvkcttagcltkhlydssksrtyekdgtkvemvsgffskdlvtv
gnlslpykfievidtngfeptytastfdgilglgwkdlsigsvdpivvelknqnkienal
ftfylpvhdkhtgfltiggieerfyegpltyeklnhdlywqitldahvgnimlekanciv
dsgtsaitvptdflnkmlqnldvikvpflpfyvtlcnnsklptfeftsengkytlepeyy
lqhiedvgpglcmlniigldfpvptfilgdpfmrkyftvfdydnhsvgialakknl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1pfzD (D:)
grgsehltigfkvenahdrilktikthklknyikesvnflnsgltktnylgssndnielv
dfqnimfygdaevgdnqqpftfildtgsanlwvpsvkcttagcltkhlydssksrtyekd
gtkvemnyvsgtvsgffskdlvtvgnlslpykfievidtngfeptytastfdgilglgwk
dlsigsvdpivvelknqnkienalftfylpvhdkhtgfltiggieerfyegpltyeklnh
dlywqitldahvgnimlekancivdsgtsaitvptdflnkmlqnldvikvpflpfyvtlc
nnsklptfeftsengkytlepeyylqhiedvgpglcmlniigldfpvptfilgdpfmrky
ftvfdydnhsvgialakknl

    Sequence, based on observed residues (ATOM records): (download) 
    >1pfzD (D:)
hltigfkvenahdrilktikthklknyikesvnflnsgltktnylgssndnielvdfqni
mfygdaevgdnqqpftfildtgsanlwvpsvkcttagcltkhlydssksrtyekdgtkve
mvsgffskdlvtvgnlslpykfievidtngfeptytastfdgilglgwkdlsigsvdpiv
velknqnkienalftfylpvhdkhtgfltiggieerfyegpltyeklnhdlywqitldah
vgnimlekancivdsgtsaitvptdflnkmlqnldvikvpflpfyvtlcnnsklptfeft
sengkytlepeyylqhiedvgpglcmlniigldfpvptfilgdpfmrkyftvfdydnhsv
gialakknl