PDB entry 1pdi

View 1pdi on RCSB PDB site
Description: fitting of the c-terminal part of the short tail fibers into the cryo- em reconstruction of t4 baseplate
Deposited on 2003-05-19, released 2003-09-09
The last revision prior to the SCOP 1.67 freeze date was dated 2003-09-09, with a file datestamp of 2003-09-09.
Experiment type: EM
Resolution: N/A
R-factor: N/A
AEROSPACI score: -0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Domains in SCOP 1.67: d1pdia_
  • Chain 'B':
    Domains in SCOP 1.67: d1pdib_
  • Chain 'C':
    Domains in SCOP 1.67: d1pdic_
  • Chain 'D':
    Domains in SCOP 1.67: d1pdid_
  • Chain 'E':
    Domains in SCOP 1.67: d1pdie_
  • Chain 'F':
    Domains in SCOP 1.67: d1pdif_
  • Chain 'G':
    Domains in SCOP 1.67: d1pdig_
  • Chain 'H':
    Domains in SCOP 1.67: d1pdih_
  • Chain 'I':
    Domains in SCOP 1.67: d1pdii_
  • Chain 'J':
    Domains in SCOP 1.67: d1pdij_
  • Chain 'K':
    Domains in SCOP 1.67: d1pdik_
  • Chain 'L':
    Domains in SCOP 1.67: d1pdil_
  • Chain 'M':
    Domains in SCOP 1.67: d1pdim_
  • Chain 'N':
    Domains in SCOP 1.67: d1pdin_
  • Chain 'O':
    Domains in SCOP 1.67: d1pdio_
  • Chain 'P':
    Domains in SCOP 1.67: d1pdip_
  • Chain 'Q':
    Domains in SCOP 1.67: d1pdiq_
  • Chain 'R':
    Domains in SCOP 1.67: d1pdir_

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiA (A:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiB (B:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiC (C:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiD (D:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiE (E:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiF (F:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiG (G:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiH (H:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiI (I:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiJ (J:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiK (K:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiL (L:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiM (M:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke

  • Chain 'N':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiN (N:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke

  • Chain 'O':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiO (O:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiP (P:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke

  • Chain 'Q':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiQ (Q:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke

  • Chain 'R':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1pdiR (R:)
lngrgsttsmrgvvkltttagsqsggdassalawnadvihqrggqtingtlrinntltia
sgganitgtvnmtggyiqgkrvvtqneidrtipvgaimmwaadslpsdawrfchggtvsa
sdcplyasrigtryggsssnpglpdmrglfvrgsgrgshltnpnvngndqfgkprlgvgc
tggyvgevqiqqmsyhkhaggfgehddlgafgntrrsnfvgtrkgldwdnrsyftndgye
idpesqrnskytlnrpelignetrpwnislnyiikvke