PDB entry 1pck

View 1pck on RCSB PDB site
Description: Aquifex aeolicus KDO8PS in complex with Z-methyl-PEP
Class: lyase
Keywords: beta(8)/alpha(8) barrel, Lyase
Deposited on 2003-05-16, released 2004-02-17
The last revision prior to the SCOP 1.75 freeze date was dated 2004-02-17, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.203
AEROSPACI score: 0.57 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2-dehydro-3-deoxyphosphooctonate aldolase
    Species: Aquifex aeolicus
    Gene: KDSA OR AQ_085
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1pcka_
  • Chain 'B':
    Compound: 2-dehydro-3-deoxyphosphooctonate aldolase
    Species: Aquifex aeolicus
    Gene: KDSA OR AQ_085
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1pckb_
  • Heterogens: PO4, CD, PEZ, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1pckA (A:)
    mekflviagpcaieseelllkvgeeikrlsekfkevefvfkssfdkanrssihsfrghgl
    eygvkalrkvkeefglkittdiheswqaepvaevadiiqipaflcrqtdlllaaaktgra
    vnvkkgqflapwdtknvveklkfggakeiyltergttfgynnlvvdfrslpimkqwakvi
    ydathsvqlpgglgdksggmrefifpliraavavgcdgvfmethpepekalsdastqlpl
    sqlegiieaileirevaskyyetipvk
    

    Sequence, based on observed residues (ATOM records): (download)
    >1pckA (A:)
    ekflviagpcaieseelllkvgeeikrlsekfkevefvfkssfdkanrssihsfrghgle
    ygvkalrkvkeefglkittdiheswqaepvaevadiiqipaflcrqtdlllaaaktgrav
    nvkkgqflapwdtknvveklkfggakeiyltergttfgynnlvvdfrslpimkqwakviy
    dathsvqlpgglgmrefifpliraavavgcdgvfmethpepekalsdastqlplsqlegi
    ieaileirevaskyyeti
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1pckB (B:)
    mekflviagpcaieseelllkvgeeikrlsekfkevefvfkssfdkanrssihsfrghgl
    eygvkalrkvkeefglkittdiheswqaepvaevadiiqipaflcrqtdlllaaaktgra
    vnvkkgqflapwdtknvveklkfggakeiyltergttfgynnlvvdfrslpimkqwakvi
    ydathsvqlpgglgdksggmrefifpliraavavgcdgvfmethpepekalsdastqlpl
    sqlegiieaileirevaskyyetipvk
    

    Sequence, based on observed residues (ATOM records): (download)
    >1pckB (B:)
    kflviagpcaieseelllkvgeeikrlsekfkevefvfkssfdkanrssihsfrghgley
    gvkalrkvkeefglkittdiheswqaepvaevadiiqipaflcrqtdlllaaaktgravn
    vkkgqflapwdtknvveklkfggakeiyltergttfgynnlvvdfrslpimkqwakviyd
    athsvqlpggmrefifpliraavavgcdgvfmethpepekalsdastqlplsqlegiiea
    ileirevaskyyeti