PDB entry 1pb6

View 1pb6 on RCSB PDB site
Description: Crystal structure of hypothetical transcriptional regulator ycdC
Class: transcription
Keywords: Helix-loop-helix, hypothetical transcriptional regulator, dimer, Structural Genomics, PSI, Protein Structure Initiative, New York Structural GenomiX Research Consortium, NYSGXRC
Deposited on 2003-05-14, released 2003-05-27
The last revision prior to the SCOP 1.73 freeze date was dated 2005-01-25, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.238
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hypothetical transcriptional regulator ycdC
    Species: Escherichia coli
    Gene: ycdC
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1pb6a1, d1pb6a2
  • Chain 'B':
    Compound: Hypothetical transcriptional regulator ycdC
    Species: Escherichia coli
    Gene: ycdC
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1pb6b1, d1pb6b2
  • Chain 'C':
    Compound: Hypothetical transcriptional regulator ycdC
    Species: Escherichia coli
    Gene: ycdC
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1pb6c1, d1pb6c2
  • Chain 'D':
    Compound: Hypothetical transcriptional regulator ycdC
    Species: Escherichia coli
    Gene: ycdC
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1pb6d1, d1pb6d2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1pb6A (A:)
mtqgavkttgkrsravsakkkailsaaldtfsqfgfhgtrleqiaelagvsktnllyyfp
skealyiavlrqildiwlaplkafredfaplaaikeyirlklevsrdypqasrlfcmeml
agapllmdeltgdlkalideksaliagwvksgklapidpqhlifmiwastqhyadfapqv
eavtgatlrdevffnqtvenvqriiiegirpr

    Sequence, based on observed residues (ATOM records): (download) 
    >1pb6A (A:)
avsakkkailsaaldtfsqfgfhgtrleqiaelagvsktnllyyfpskealyiavlrqil
diwlaplkafredfaplaaikeyirlklevsrdypqasrlfcmemlagapllmdeltgdl
kalideksaliagwvksgklapidpqhlifmiwastqhyadfapqveavtgatlrdevff
nqtvenvqriiiegirpr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1pb6B (B:)
mtqgavkttgkrsravsakkkailsaaldtfsqfgfhgtrleqiaelagvsktnllyyfp
skealyiavlrqildiwlaplkafredfaplaaikeyirlklevsrdypqasrlfcmeml
agapllmdeltgdlkalideksaliagwvksgklapidpqhlifmiwastqhyadfapqv
eavtgatlrdevffnqtvenvqriiiegirpr

    Sequence, based on observed residues (ATOM records): (download) 
    >1pb6B (B:)
avsakkkailsaaldtfsqfgfhgtrleqiaelagvsktnllyyfpskealyiavlrqil
diwlaplkafredfaplaaikeyirlklevsrdypqasrlfcmemlagapllmdeltgdl
kalideksaliagwvksgklapidpqhlifmiwastqhyadfapqveavtgatlrdevff
nqtvenvqriiiegirpr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1pb6C (C:)
mtqgavkttgkrsravsakkkailsaaldtfsqfgfhgtrleqiaelagvsktnllyyfp
skealyiavlrqildiwlaplkafredfaplaaikeyirlklevsrdypqasrlfcmeml
agapllmdeltgdlkalideksaliagwvksgklapidpqhlifmiwastqhyadfapqv
eavtgatlrdevffnqtvenvqriiiegirpr

    Sequence, based on observed residues (ATOM records): (download) 
    >1pb6C (C:)
avsakkkailsaaldtfsqfgfhgtrleqiaelagvsktnllyyfpskealyiavlrqil
diwlaplkafredfaplaaikeyirlklevsrdypqasrlfcmemlagapllmdeltgdl
kalideksaliagwvksgklapidpqhlifmiwastqhyadfapqveavtgatlrdevff
nqtvenvqriiiegirpr

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1pb6D (D:)
mtqgavkttgkrsravsakkkailsaaldtfsqfgfhgtrleqiaelagvsktnllyyfp
skealyiavlrqildiwlaplkafredfaplaaikeyirlklevsrdypqasrlfcmeml
agapllmdeltgdlkalideksaliagwvksgklapidpqhlifmiwastqhyadfapqv
eavtgatlrdevffnqtvenvqriiiegirpr

    Sequence, based on observed residues (ATOM records): (download) 
    >1pb6D (D:)
avsakkkailsaaldtfsqfgfhgtrleqiaelagvsktnllyyfpskealyiavlrqil
diwlaplkafredfaplaaikeyirlklevsrdypqasrlfcmemlagapllmdeltgdl
kalideksaliagwvksgklapidpqhlifmiwastqhyadfapqveavtgatlrdevff
nqtvenvqriiiegirpr