PDB entry 1p84
View 1p84 on RCSB PDB site
Description: HDBT inhibited Yeast Cytochrome bc1 Complex
Class: oxidoreductase
Keywords: cytochrome bc1 complex, complex III, ubiquinol, cytochrome c oxidoreductase, hydroxyquinone, HHDBT, Qo site, phospholipid, membrane protein
Deposited on
2003-05-06, released
2003-07-29
The last revision prior to the SCOP 1.75 freeze date was dated
2003-07-29, with a file datestamp of
2007-06-28.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.228
AEROSPACI score: 0.34
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: ubiquinol-cytochrome c reductase complex core protein I
Species: Saccharomyces cerevisiae
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1p84a1, d1p84a2 - Chain 'B':
Compound: ubiquinol-cytochrome c reductase complex core protein 2
Species: Saccharomyces cerevisiae
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1p84b1, d1p84b2 - Chain 'C':
Compound: cytochrome b
Species: Saccharomyces cerevisiae
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1p84c1, d1p84c2 - Chain 'D':
Compound: cytochrome c1, heme protein
Species: Saccharomyces cerevisiae
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1p84d1, d1p84d2 - Chain 'E':
Compound: ubiquinol-cytochrome c reductase iron-sulfur subunit
Species: Saccharomyces cerevisiae
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1p84e1, d1p84e2 - Chain 'F':
Compound: Ubiquinol-cytochrome c reductase complex 17 kDa protein
Species: Saccharomyces cerevisiae
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1p84f_ - Chain 'G':
Compound: Ubiquinol-cytochrome c reductase complex 14 kDa protein
Species: Saccharomyces cerevisiae
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1p84g_ - Chain 'H':
Compound: ubiquinol-cytochrome c reductase complex ubiquinone-binding protein qp-c
Species: Saccharomyces cerevisiae
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1p84h_ - Chain 'I':
Compound: Ubiquinol-cytochrome c reductase complex 7.3 kDa protein
Species: Saccharomyces cerevisiae
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1p84i_ - Chain 'J':
Compound: heavy chain (vh) of fv-fragment
Species: MUS MUSCULUS
Domains in SCOP 1.75: d1p84j_ - Chain 'K':
Compound: light chain (vl) of fv-fragment
Species: MUS MUSCULUS
Domains in SCOP 1.75: d1p84k_ - Heterogens: HEM, FES, DBT, UQ6, 3PE, 3PH, PC1, UMQ, CDL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1p84A (A:)
aevtqlsngivvatehnpsahtasvgvvfgsgaanenpynngvsnlwkniflskensava
akeglalssnisrdfqsyivsslpgstdksldflnqsfiqqkanllsssnfeatkksvlk
qvqdfedndhpnrvlehlhstafqntplslptrgtleslenlvvadlesfannhflnsna
vvvgtgnikhedlvnsiesknlslqtgtkpvlkkkaaflgsevrlrddtlpkawislave
gepvnspnyfvaklaaqifgsynafepasrlqgiklldniqeyqlcdnfnhfslsykdsg
lwgfstatrnvtmiddlihftlkqwnrltisvtdteveraksllklqlgqlyesgnpvnd
anllgaevlikgsklslgeafkkidaitvkdvkawagkrlwdqdiaiagtgqieglldym
rirsdmsmmrw
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1p84B (B:)
ltvsardaptkistlavkvhggsryatkdgvahllnrfnfqntntrsalklvresellgg
tfkstldreyitlkatflkddlpyyvnaladvlyktafkpheltesvlpaarydyavaeq
cpvksaedqlyaitfrkglgnpllydgvervslqdikdfadkvytkenlevsgenvvead
lkrfvdesllstlpagkslvsksepkfflgeenrvrfigdsvaaigipvnkaslaqyevl
anyltsalselsglissakldkftdgglftlfvrdqdsavvssnikkivadlkkgkdlsp
ainytklknavqnesvsspielnfdavkdfklgkfnyvavgdvsnlpyldel
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1p84C (C:)
mafrksnvylslvnsyiidspqpssinywwnmgsllglclviqivtgifmamhyssniel
afssvehimrdvhngyilrylhangasfffmvmfmhmakglyygsyrsprvtlwnvgvii
ftltiataflgyccvygqmshwgatvitnlfsaipfvgndivswlwggfsvsnptiqrff
alhylvpfiiaamvimhlmalhihgssnplgitgnldripmhsyfifkdlvtvflfmlil
alfvfyspntlghpdnyipgnplvtpasivpewyllpfyailrsipdkllgvitmfaail
vllvlpftdrsvvrgntfkvlskffffifvfnfvllgqigachvevpyvlmgqiatfiyf
ayfliivpvistienvlfyigrvnk
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1p84D (D:)
mtaaehglhapayawshngpfetfdhasirrgyqvyrevcaachsldrvawrtlvgvsht
neevrnmaeefeyddepdeqgnpkkrpgklsdyipgpypneqaaraanqgalppdlsliv
karhggcdyifslltgypdeppagvalppgsnynpyfpggsiamarvlfddmveyedgtp
attsqmakdvttflnwcaepehderkrlglktviilsslyllsiwvkkfkwagiktrkfv
fnppkp
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>1p84E (E:)
kstyrtpnfddvlkenndadkgrsyayfmvgamgllssagakstvetfissmtatadvla
makvevnlaaiplgknvvvkwqgkpvfirhrtpheiqeansvdmsalkdpqtdadrvkdp
qwlimlgicthlgcvpigeagdfggwfcpchgshydisgrirkgpaplnleipayefdgd
kvivg
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>1p84F (F:)
vtdqledlrehfknteegkalvhhyeecaervkiqqqqpgyadlehkedcveeffhlqhy
ldtataprlfdklk
- Chain 'G':
Sequence; same for both SEQRES and ATOM records: (download)
>1p84G (G:)
qsftsiarigdyilkspvlsklcvpvanqfinlagykklglkfddliaeenpimqtalrr
lpedesyarayriirahqtelthhllprnewikaqedvpyllpyileaeaaakekdeldn
ievsk
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>1p84H (H:)
gppsgktymgwwghmggpkqkgitsyavspyaqkplqgifhnavfnsfrrfksqflyvli
pagiywywwkngneyneflyskagreelervnv
- Chain 'I':
Sequence; same for both SEQRES and ATOM records: (download)
>1p84I (I:)
sslyktffkrnavfvgtifagafvfqtvfdtaitswyenhnkgklwkdvkariaa
- Chain 'J':
Sequence; same for both SEQRES and ATOM records: (download)
>1p84J (J:)
evklqesgaglvqpsqslsltcsvtgysitsgyywnwirlfpgnklewvgyisnvgdnny
npslkdrlsitrdtsknqfflklnsvttedtatyycarseyysvtgyamdywgqgttvtv
ssawrhp
- Chain 'K':
Sequence; same for both SEQRES and ATOM records: (download)
>1p84K (K:)
dieltqtpvslaaslgdrvtiscrasqdinnflnwyqqkpdgtiklliyytsrlhagvps
rfsgsgsgtdysltisnlepediatyfcqhhikfpwtfgagtkleik