PDB entry 1p7q
View 1p7q on RCSB PDB site
Description: Crystal Structure of HLA-A2 Bound to LIR-1, a Host and Viral MHC Receptor
Class: Immune system
Keywords: HLA-A2/Lir-1 Complex, Immune system
Deposited on
2003-05-05, released
2003-10-14
The last revision prior to the SCOPe 2.07 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 3.4 Å
R-factor: 0.218
AEROSPACI score: 0.14
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: HLA class I histocompatibility antigen, A-2 alpha chain
Species: Homo sapiens [TaxId:9606]
Gene: HLA-A OR HLAA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1p7qa1, d1p7qa2 - Chain 'B':
Compound: Beta-2-microglobulin
Species: Homo sapiens [TaxId:9606]
Gene: B2M
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1p7qb_ - Chain 'C':
Compound: Pol polyprotein
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: leukocyte immunoglobulin-like receptor 1
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1p7qd1, d1p7qd2
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1p7qA (A:)
gshsmryfftsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
dgetrkvkahsqthrvdlgtlrgyynqseagshtvqrmygcdvgsdwrflrgyhqyaydg
kdyialkedlrswtaadmaaqttkhkweaahvaeqlraylegtcvewlrrylengketlq
rtdapkthmthhavsdheatlrcwalsfypaeitltwqrdgedqtqdtelvetrpagdgt
fqkwaavvvpsgqeqrytchvqheglpkpltlrwep
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1p7qB (B:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
Sequence, based on observed residues (ATOM records): (download)
>1p7qB (B:)
iqrtpkiqvysrhpaenflncyvsgfhpsdievdllkngeriekvehsdlsfskdwsfyl
lyyteftptdeyacrvnhvtlsqpkivkwdrdm
- Chain 'C':
No sequence available.
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1p7qD (D:)
hlpkptlwaepgsvitqgspvtlrcqggqetqeyrlyrekktapwitripqelvkkgqfp
ipsitwehagryrcyygsdtagrsessdplelvvtgayikptlsaqpspvvnsggnvtlq
cdsqvafdgfilckegedehpqclnsqphargssraifsvgpvspsrrwwyrcyaydsns
pyewslpsdllellvlg
Sequence, based on observed residues (ATOM records): (download)
>1p7qD (D:)
pkptlwaepgsvitqgspvtlrcqtqeyrlyrekktapwitripqelvkkgqfpipsitw
ehagryrcyyrsessdplelvvtgayikptlsaqpspvvnsggnvtlqcdsqvafdgfil
ckegehpqclnsqphargssraifsvgpvspsrrwwyrcyaydsnspyewslpsdllell
vlg